| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3091 |
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| Symbol | |
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| ID | 1221955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3327984 |
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| End bp | 3329114 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239509 |
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| Product | outer membrane porin signal peptide protein |
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| Protein accession | NP_521212 |
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| Protein GI | 17547810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.314497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CTGCCATTCT GGTTGCAGTC GGCGCCCTGT TCGCAGGTTC GGCCTACGCC
CAATCGAGCG TGACGCTGTA CGGCATTGTC GATGCCACCA TTCACTACAC CACCAACGCG
AACCAAGCCG GCAACAGCCT GCTGCGTATG GACAACGGCG CGGTGTCCAA CAGCCGCTGG
GGTCTGAAAG GCTCGGAAGA TCTGGGTGGC GGCAACAAGG CGCTGTTCGT GCTGGAAAGC
GGCTTTGATC CGGACACCGG CCGCGTCAAC AGCGGCGGGT TGTTCAACCG TCAATCCTTC
GTGGGCCTGT CCAACAAGGA CTACGGCACG CTGACGATGG GCCGCCAATA CAACTTCGGC
TTCACGATGG GCGGCAACTT CGACCCGCTG GGCGTGGGCA ACTACGACGA AAACTCGTGG
CTCTACTACG GCGTGACGGG TCTGCGCGTG TCGAACATGC TCAAGTACGA AGGCAAGTGG
AACGGCCTGT ACGTTGGCCT GGGCTACGGC TTCGGCGAGC AGGCCGGCAG CACGGCAAAC
AACCGCTACA TGGGCGGCGC GGTGTCGTAT GAATTCGGCC CGGCCCTGAT CGGCGCGTTC
TACCAGCAAC AGCAGGATTC CACCGCCGCC GGCAACAAGC AGAAGGTGTG GGGTATCGGC
GGCAACTACA CCATTGGTGC TGCCAAGCTG TTCGCGGGCT ACATCGACAG CAGCGATAAC
ACGGGCTGCG TGAACAGCAG CACCTGCGCG GGCGACCGCA GCACCTTTGG CCTGAACCTG
TATAACAACG CATCGGGTCC TGGTCTGACC CCGGGCGCCA CCAAGCGTCG CGACCACATC
GGTCTGGCTG GCCTGACCTA CCAGGTCACG CCGGCGCTGG CGCTGACGGG TGCGTTCTAC
TACGACAGCA TCAGCAACGC TGCGCTGGAC GCCGGCAACG ACGGCAAGCG CTACACCGGT
GTCCTGCTTG CCGAGTACTC GCTGTCCAAG CGTACCCAGG TGTACGGCAC CGTGGCCTAC
GACAAGGTCA AGAACGCTGC CATTCCGGAA CAACCGGGCG GCACGGGCAC GGGCATCAAC
GCCAAGACCA ACCAAATCGG CGTGGGCGCA GGCATCCGTC ACATCTTCTG A
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| Protein sequence | MKKSAILVAV GALFAGSAYA QSSVTLYGIV DATIHYTTNA NQAGNSLLRM DNGAVSNSRW
GLKGSEDLGG GNKALFVLES GFDPDTGRVN SGGLFNRQSF VGLSNKDYGT LTMGRQYNFG
FTMGGNFDPL GVGNYDENSW LYYGVTGLRV SNMLKYEGKW NGLYVGLGYG FGEQAGSTAN
NRYMGGAVSY EFGPALIGAF YQQQQDSTAA GNKQKVWGIG GNYTIGAAKL FAGYIDSSDN
TGCVNSSTCA GDRSTFGLNL YNNASGPGLT PGATKRRDHI GLAGLTYQVT PALALTGAFY
YDSISNAALD AGNDGKRYTG VLLAEYSLSK RTQVYGTVAY DKVKNAAIPE QPGGTGTGIN
AKTNQIGVGA GIRHIF
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