| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3084 |
|---|
| Symbol | |
|---|
| ID | 1221947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3321077 |
|---|
| End bp | 3321961 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637239501 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_521205 |
|---|
| Protein GI | 17547803 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.286797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CGCAGCACGA CGAACACGAG CCCCTGATCA AGACCCCCAA GCAACTGATC
ATCGCGGTGA TCGCCGCGTT TGCTGTTCCG ATTCTCGTCA TCATCCTGCT GGCCAACTAT
GTCGGCCTTG GTGTCAAGGA GGGCGCGGGC AGTTCCGGCA TGTCGGAAGA GGCCGTCAAT
GATCGGATCA AGCCGGTTGC GCATCTCGAG CTGAAGGACG TGAACGCGCC GCACGTCTAT
AAGACCGGGG AGCAACTCTA CAAGGAAGTC TGCGCGACTT GTCACGCAGC GGGCGTGGCC
GGCGCGCCCA AGTTTGGCGA TGCGGCCAGC TGGGCATCGC GCCTGCCGCA AGGCCTGGAC
GGCCTGACCA AGGTGGCGCT TGCCGGCAAG GGTGGCATGC CCGCGCGCGG CGGTACCTCG
CCGGATGACG TGAGCGACTA CGAGATCGAG CGCGCGATCG TCTACATGGC CAATTCGGGC
GGCGGCAAGC TGCAGGAACC GCCCGCGCCG GCCGCCGGTG CTGCGGCGCC GGCATCGGCG
GCCGCACCGC AGGCGTCGGA GGCTCCGGCT GCCGCACCTG CTGCGGCCCC CGCAGTCGCA
GCCCCGGCCG CGCCCGCCGC TGCGGCAGCG CCGCAAGCCG CCGCCGGCGA CATCGGCAAG
AAGGTCTACG ACTCGACCTG CCAGATGTGC CACGCCGCCG GTGTGGCCGG TGCTCCCAAG
TTTGGCGACA AGGCTGCCTG GGCGCCGCGC ATCGCCGAGG GCAAGGCCAA GATGTACGAT
ATCGCGCTGC ACGGCAAGGG TGCCATGCCG CCGAAGGGCA CCTATGCCGG TTCGGATGAC
GACGTGAAGG CCGCCGTCGA TTTCATGGCT GCCGCTGCCA AGTAA
|
|---|
| Protein sequence | MSDAQHDEHE PLIKTPKQLI IAVIAAFAVP ILVIILLANY VGLGVKEGAG SSGMSEEAVN
DRIKPVAHLE LKDVNAPHVY KTGEQLYKEV CATCHAAGVA GAPKFGDAAS WASRLPQGLD
GLTKVALAGK GGMPARGGTS PDDVSDYEIE RAIVYMANSG GGKLQEPPAP AAGAAAPASA
AAPQASEAPA AAPAAAPAVA APAAPAAAAA PQAAAGDIGK KVYDSTCQMC HAAGVAGAPK
FGDKAAWAPR IAEGKAKMYD IALHGKGAMP PKGTYAGSDD DVKAAVDFMA AAAK
|
|---|
| |