| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3060 |
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| Symbol | |
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| ID | 1221923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3297795 |
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| End bp | 3299096 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239477 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_521181 |
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| Protein GI | 17547779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.173867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC ACAACCCTAA CGAATCCAAA GCCCGCGCCA TCTTCCGGGT CGTCAGCGGC
AACTTCCTCG AGATGTTCGA CTTCATGGTC TACGGCTACT ACGCCACGGC CATTGCAGCG
ACGTTCTTCC CCGCAGGCAA CGCCTTCCTG TCGCTAATGC TATCGCTGAT GACCTTCGGC
GCCGGCTTCC TGATGCGGCC GCTGGGCGCG ATCGTCCTGG GCGCCTACAT CGACCGCCAC
GGCCGCCGCG CCGGCCTGAT CCTGACGCTG GTGCTGATGG CCTGCGGCAC GATGCTGATC
GCGCTGGTGC CGGGCTACGG CACCATCGGC CTGGCCGCGC CGCTGCTGGT GCTGATCGGC
CGCCTGCTGC AAGGCTTCTC GGCCGGCGGC GAGCCGGGCG GGGTCTCGGT CTACCTGTCG
GAAATCGCGA CGCCGGGCCG CAAAGGCTTC TACGTGAGCT GGCAGTCCGG CAGCCAGCAG
GTGGCGGTGA TGTTCGCCGC GCTGCTGGGC GTGCTGCTCT CGTTCAAGCT CTCGCCCAAG
GAAATGGGCG AATGGGGCTG GCGCGTGCCG TTCCTGATCG GCTGCCTGAT CGTGCCGTTC
CTGTTCTTCA TCCGCCGCTC GCTGCGCGAG ACGGAGGAGT TCGAGCAGCG CAAGCACCGC
CCGACCATGG GCGAGCTGCT CCGCTCGATG GGCGAGAACT GGCGCCTCGC GGGCGCAGGC
ACGCTGCTGG CCGTGATGAC CACGGTGTCG TTCTACCTGA TCACGGCCTA CACGCCGACC
TTCGGCCGGA ACGTGCTGCA CATGTCGGAT TTCGACAGCC TGATCGTCAC GCTGTGCGTG
GGCGCGTCCA ACCTCATCTG GCTGCCGGTG ATGGGCTCGC TGTCCGACCG CATCGGCCGC
CGCACGCCGC TGATCGTCTT CAGCGCGCTG ACGCTGCTGA CGGCCTACCC GGCCATGACG
TGGCTGATCG CCGAGCCGTC GTTCGGCCGC CTGCTGGCGG TGGAGCTGTG GCTGTCGTTC
CTGTACGGCG GCTACAACGG CGCCATGATC GTCACGCTCA CCGAGATCAT GCCGCCGCAG
CTGCGCACCA CGGGCTTCTC GCTGGCCTAC AGCCTGGCGA CCGCCATCTT CGGCGGCTTC
ACCCCGGCCA TCGCCACCGG GCTGATCCAC GCCACCGGCA ACAAGGCCAT GCCGGGCCTG
TGGCTGTCCT TCGCCGCCAT CTGCGGCCTG GTCGCCACGC TGACGGTGGT CAAGCCGCAG
CCCCGTCCCG CCGCCATGCC GGACCCCCTG CTCGAGCCGT AA
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| Protein sequence | MHTHNPNESK ARAIFRVVSG NFLEMFDFMV YGYYATAIAA TFFPAGNAFL SLMLSLMTFG
AGFLMRPLGA IVLGAYIDRH GRRAGLILTL VLMACGTMLI ALVPGYGTIG LAAPLLVLIG
RLLQGFSAGG EPGGVSVYLS EIATPGRKGF YVSWQSGSQQ VAVMFAALLG VLLSFKLSPK
EMGEWGWRVP FLIGCLIVPF LFFIRRSLRE TEEFEQRKHR PTMGELLRSM GENWRLAGAG
TLLAVMTTVS FYLITAYTPT FGRNVLHMSD FDSLIVTLCV GASNLIWLPV MGSLSDRIGR
RTPLIVFSAL TLLTAYPAMT WLIAEPSFGR LLAVELWLSF LYGGYNGAMI VTLTEIMPPQ
LRTTGFSLAY SLATAIFGGF TPAIATGLIH ATGNKAMPGL WLSFAAICGL VATLTVVKPQ
PRPAAMPDPL LEP
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