| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3059 |
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| Symbol | |
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| ID | 1221922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3295987 |
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| End bp | 3297282 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239476 |
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| Product | sugar transporter transmembrane protein |
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| Protein accession | NP_521180 |
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| Protein GI | 17547778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.45158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACCC ACAACCCCAA CGAATCCAAG GCCCGTTCCA TCTTCCGGGT GGTCAGCGGT
AACTTCCTGG AGATGTACGA CTTCATGGTC TACGGCTACT ACGCCAAGGC CATCGCGGAC
ACCTTCTTCC CGGCCGACAA CGAGTTCCTC TCGCTGATGC TGTCGCTGGT GACCTTCGGC
GTCGGCTTCC TGATGCGGCC GCTGGGCGCG CTGATCCTGG GCGCCTACAT CGACCGCCAC
GGCCGCCGCG CCGGCCTGAT CCTGACGCTG GGGCTGATGG CCTGCGGCAC GCTGCTGATC
GCGCTGGTGC CGGGCTATGC AACGATCGGC CTGGCGGCGC CGCTGCTGGT GCTGATCGGC
CGCCTGCTGC AAGGCTTCTC GGCCGGCGTG GAGCTGGGCG GGGTGTCGGT CTACCTGGCG
GAAATCTCGA CGCCGGGCCG CAAGGGCTTC TTCGTGAGCT GGCAATCGGC CAGCCAGCAG
GTGGCGGTGA TGTTCGCCGC GCTGCTGGGC GTGCTGCTGT CGTTCCAGCT CTCGCCCAAG
GAAATGGGTG AGTGGGGCTG GCGCGTGCCG TTCCTGGTCG GCTGCCTGAT CGTGCCGTTC
CTGTTCCTCA TCCGCCGCTC GCTGCAAGAG ACGGAGGAGT TCAAGCAGCG CAAGCACCGT
CCGGCGCTGG GCGAGATCTT CCGCTCGATG GGCGAGAACT GGCGCCTGGT GGGCGCGGGC
ACGCTGCTGG TGGTGATGAC CACGGTGTCG TTCTACCTGA TCACGGCCTA CACGCCGACC
TTCGGCAAGA GCGTGCTGCA CCTGTCGAAC CTCGACAGCC TGATCGTCAC GCTGTGCGTA
GGCGCCTCCA ACTTCTTCTG GCTGCCGGTG ATGGGCTCGG TGTCCGACCG CATCGGCCGC
CGCCCGCTGC TGATCACCTT CACCGCGCTG ACGCTGCTGA CGGCCTATCC GGCGATGCAG
TGGCTGATCG CCGAGCCGTC GTTCGGCCGC CTGCTGGCCG TGGAGCTGTG GCTGTCGTTC
CTGTACGGCA GCTATAACGG CGCGATGGTG GTGACGCTCA CCGAGATCAT GCCGCCGGCG
GTGCGCACCA CCGGGTTCTC GCTGGCCTAC AGCCTGGCGA CCGCCATCTT CGGCGGCTTC
ACCCCGGCCA TCGCCACCTG GCTGATCCAC GCTACCGGCA ACAAGGCCAT GCCGGGCCTG
TGGCTGTCCT TCGCCGCCAT CTGCGGCCTG GTCGCCACGC TGATCGTGGT CAAGCCGGCG
GGCCGCCACG TGCACACCAC CGTGACGACC GCCTGA
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| Protein sequence | MHTHNPNESK ARSIFRVVSG NFLEMYDFMV YGYYAKAIAD TFFPADNEFL SLMLSLVTFG
VGFLMRPLGA LILGAYIDRH GRRAGLILTL GLMACGTLLI ALVPGYATIG LAAPLLVLIG
RLLQGFSAGV ELGGVSVYLA EISTPGRKGF FVSWQSASQQ VAVMFAALLG VLLSFQLSPK
EMGEWGWRVP FLVGCLIVPF LFLIRRSLQE TEEFKQRKHR PALGEIFRSM GENWRLVGAG
TLLVVMTTVS FYLITAYTPT FGKSVLHLSN LDSLIVTLCV GASNFFWLPV MGSVSDRIGR
RPLLITFTAL TLLTAYPAMQ WLIAEPSFGR LLAVELWLSF LYGSYNGAMV VTLTEIMPPA
VRTTGFSLAY SLATAIFGGF TPAIATWLIH ATGNKAMPGL WLSFAAICGL VATLIVVKPA
GRHVHTTVTT A
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