| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3057 |
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| Symbol | mdoD |
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| ID | 1221920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3292927 |
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| End bp | 3294450 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239474 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | NP_521178 |
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| Protein GI | 17547776 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.445662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.366151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCGG CGTCCGCCGC GACGGAACCC TTCGACGAAG CCTGGCTGCG CCGGCGCGCG
CGCGCCCTTG CGGCGGGGCC CTACCGCAAG CGCAACACGG CATTGCCGCC ACCGCTGGCC
GCGCTCGGGT GGGATGCCTA CCAATCGATT GGCGCTCGTG CCGACCATGC CCTGTGGGCC
GGGCAGTCCC TGCCGTTTGA CGCAAGATTC TTCCATCTGG GCCTGTTTTT CAAGTCGCCG
GTGCGCATGC ACGAGGTGGC GGGCGGCCAG TCGCGCGTCA TCGCCTACGA CCCGGCCATG
TTCGACTACG GCAAGAGCGG GCTCGACCAT GCCGCGCTGC CCGCCGACCT CGGCTTCGCC
GGCTTCCGTC TGACCACACG CGCCGACCCG ACGCGCGACG TCGCCGCCTT CCTCGGCGCG
AGCTATTTCC GCGCGGTGGG CGGGCAGTGG CAGTACGGCA TGTCCGCGCG CGGGCTGGCG
ATCGACACCG GCCTGCGGCG GGCCGAGGAG TTTCCCGACT TCACTGAATT CTGGCTGGTG
CGCCCGGCGC CCGAAGCCGA CACGCTGCGC GTCTACGCGC TGCTCGATGC CCCCAGTGTG
GCCGGCGCCT ACCGCTTCGA CATCCGACCT GGCGACACGC TGGTGATGGA CGTGCAGGCC
ACGCTGTTCG TGCGCAAGCC GATCGAGCGG CTCGGCATCG CGCCGCTGAC CAGCATGTTC
CTGTACGGCG AGAACGACCG CACCGACCGC GCGGGGGATC GCCAGAGCGC GGCCCGCCGC
TGGCGCGCTT CCGACTGGCG CCCGGAGATC CACGATTCCG ACGGGCTGGC CATCTGGCGC
GGCTCGGGCG AATGGATCTG GCGGCCGCTG GCCAACCCGC CCGCGCTGCG CAGCCAGCGC
TTCGCCGACG ATGGCCCGCG CGGCTTCGGC CTGCTGCAGC GCGACCGCAA CCCGGATCAC
TATCAGGACG ACGGGGTGTT CTACGAAAAG CGCCCCAGCG TCTGGGTCGA GCCCGCGCAC
GGCTGGGGCG AGGGCGCGGT GGAGCTGGTC GAGCTGTCCG CTGCCGACGA GACCTTCGAC
AACATCGTCG CCTTCTGGCG GCCGGCCGTG GCGCCGCAGG CCGGCCAGGA GCTGGCCTTC
GGCTACCGGC TGAGTTGGGG CGCCCAGCCC CCGGTGGCGC CGCCGCTGGC GCGCGTGGTG
GCCACGCGCA CCGGCATCGG CGGCATCGTC GGGCAGCCGC GCAGGCATTT TTCGTGGCGC
TTCGTGATCG ATTTCGCCGG CGGCGAACTG GGCCAGCCCG GCCGCGCCGC CGTCGAGCCC
GTCATCCGCG TCTCGCGCGG GCGCGTAGAG ATCGTCTCGG CCCGGCCGCT GGCCAACATC
GACGGCGTGC GCGCGATGTT CGACCTGGTG CCGGATGCCG GCAACGCGCC CATCGAACTG
CAACTGACGC TGCAATCCGG CGACCGGCCG CTGTCGGAGA CCTGGGCGTA CCAGTGGACA
CCGCCGGCGG ATCGGGCCGT GTAG
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| Protein sequence | MSPASAATEP FDEAWLRRRA RALAAGPYRK RNTALPPPLA ALGWDAYQSI GARADHALWA
GQSLPFDARF FHLGLFFKSP VRMHEVAGGQ SRVIAYDPAM FDYGKSGLDH AALPADLGFA
GFRLTTRADP TRDVAAFLGA SYFRAVGGQW QYGMSARGLA IDTGLRRAEE FPDFTEFWLV
RPAPEADTLR VYALLDAPSV AGAYRFDIRP GDTLVMDVQA TLFVRKPIER LGIAPLTSMF
LYGENDRTDR AGDRQSAARR WRASDWRPEI HDSDGLAIWR GSGEWIWRPL ANPPALRSQR
FADDGPRGFG LLQRDRNPDH YQDDGVFYEK RPSVWVEPAH GWGEGAVELV ELSAADETFD
NIVAFWRPAV APQAGQELAF GYRLSWGAQP PVAPPLARVV ATRTGIGGIV GQPRRHFSWR
FVIDFAGGEL GQPGRAAVEP VIRVSRGRVE IVSARPLANI DGVRAMFDLV PDAGNAPIEL
QLTLQSGDRP LSETWAYQWT PPADRAV
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