| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3051 |
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| Symbol | |
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| ID | 1221914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3287613 |
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| End bp | 3289355 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239468 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_521172 |
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| Protein GI | 17547770 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0886733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT CCTGGCGCAT GACCTTGCAG ATCAGCGCGA TCGCCCTGGC GAGCGCGCTG
GCGGCAGGTG CCGCGCACGC GGGCGAGGGC GAGGGCGAGG CGAAGAAGTG GGTGACGACG
GAGTTCCAGC CCAGCACGCT GCCGCAGGAC AAGCAGATGG CCGAAATGAA GTGGTTCATC
GACGCCGCGG CCAAGCTCAA GGCCCGCGGC GTGACCGAGA TCCACGTCGT GTCCGAAACG
CTCGACGTGC ATGCCTACGA ATCCAAGACG CTGGCCCGCG CGTTTGAAGA GATCACCGGC
ATCAAGGTCA AGCACGACAT CATGCAGGAA GGCGACGTGG TCGAGAAGCT GCAGACCTCG
ATGCAGTCCG GCAAGAGCAT CTACGACGGC TGGATCTCCG ACTCCGACCT GATCGGCACG
CACTACCGCT ACGGCGTGGT GATGCCGCTG TCGGACTACA TGGCCGGCGA AGGCAAGGAG
TTCACCAACC CGGGCCTGGA CCTGAAGGAT TTCATCGGCA CCAGCTTCAC CACCGCCTCG
GACGGCAAGC TGTACCAGTT GCCCGACCAG CAGTTCGCCA ACCTGTACTG GTTCCGCGCC
GACTGGTTCG CGCGCAAGGA CCTGCAGGAC AAGTTCAAGG CCAAGTACGG CTACGACCTG
GGCGTGCCCG TCAACTGGAC GGCCTATGAA GACATCGCCA ACTTCTTCAC CAACGACGTG
AAGGAACTGG ACGGCAAGCG CGTCTACGGC CACATGGACT ACGGCAAGAA GGACCCGTCG
CTGGGCTGGC GCTTCACCGA TGCCTGGCTG TCGATGGCCG GCTCCGCCGA CAAGGGCATC
CCCAACGGCC TGCCGGTGGA CGAATGGGGC ATCCGCGTGG AAGGGTGCGC CCCGGTCGGC
GCCTCGATGT CGCGCGGCGG TGCCACCAAC AGCCCGGCCG CCGTGTACGC CCTGACCAAG
TACATCGACT GGATGAAGAA GTACGCCCCG CCCGAGGCGA CCGGCATGAC CTTCAACGAG
GCCGGCCCGG TGCCCGCGCA GGGCCATATC GCGCAGCAGG TGTTCTGGTA CAGCGCCTTC
ACCGCGCCGA TGACCAAACC GGGCCCGGTG GTCAACACCG ACGGCTCGCC CAAGTGGCGC
ATGGCCCCGT CGCCGCACGG CCCGTACTGG AAGGACGGCA TGCAGAACGG CTACCAGGAC
GTCGGCTCGT GGACGTTCTT CAAGTCCACC CCGTTCGAGC GCCGCTCGGC CGCGTGGCTG
TACGCGCAGT TCGTCACGTC GAAGACCGTG TCGCTCAAGA AGTCGATCAC CGGCCTCACG
TTCATTCGTG ACTCCGACAT CCACAGCGAC TACTTCACCA AGAACGCGGC CAAGTACGGC
GGCCTGATCG AGTTCTACCG CAGCCCGGCC CGCGTGGCCT GGACGCCAAC CGGCAACAAC
GTGCCCGACT ATCCGAAGCT GGCGCAGCTG TGGTGGAAGA ACGTGGCGAC GGCGGTGACG
GGCGAGAAGA CCCCGCAAGG CGCCATGGAC AACCTGGCCA AGGAAATGGA CCAGGTGATG
GGCCGCCTGC AGCGCGCCGG CATGAAGAAC TGCGCGCCCA AGCTGAACCC GGAAGGCGAC
CCGGGCAAGT GGCTGTCGGC CGAGCACGCG CCGTGGAAGA AGCTCGACAA CGAGCGCCCG
AAGGGCGAGA CGGTGGCCTA CGACAAGCTG CTGGCCGCCT GGAAGGACGG CCGCGTGCGC
TGA
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| Protein sequence | MKTSWRMTLQ ISAIALASAL AAGAAHAGEG EGEAKKWVTT EFQPSTLPQD KQMAEMKWFI
DAAAKLKARG VTEIHVVSET LDVHAYESKT LARAFEEITG IKVKHDIMQE GDVVEKLQTS
MQSGKSIYDG WISDSDLIGT HYRYGVVMPL SDYMAGEGKE FTNPGLDLKD FIGTSFTTAS
DGKLYQLPDQ QFANLYWFRA DWFARKDLQD KFKAKYGYDL GVPVNWTAYE DIANFFTNDV
KELDGKRVYG HMDYGKKDPS LGWRFTDAWL SMAGSADKGI PNGLPVDEWG IRVEGCAPVG
ASMSRGGATN SPAAVYALTK YIDWMKKYAP PEATGMTFNE AGPVPAQGHI AQQVFWYSAF
TAPMTKPGPV VNTDGSPKWR MAPSPHGPYW KDGMQNGYQD VGSWTFFKST PFERRSAAWL
YAQFVTSKTV SLKKSITGLT FIRDSDIHSD YFTKNAAKYG GLIEFYRSPA RVAWTPTGNN
VPDYPKLAQL WWKNVATAVT GEKTPQGAMD NLAKEMDQVM GRLQRAGMKN CAPKLNPEGD
PGKWLSAEHA PWKKLDNERP KGETVAYDKL LAAWKDGRVR
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