| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3040 |
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| Symbol | secE |
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| ID | 1221894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3271254 |
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| End bp | 3271634 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239448 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | NP_521161 |
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| Protein GI | 17547759 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.078937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAATC CGAACGTCGA AACCGTCAAT CCCTCCAGCG GCAAGTGGCT GCTGGTCGTG
GCATTCCTGC TGGTAGTCGC GGGGGTGATC GGTTTTTACC TGCTGGCGCA GCAGCCGGGC
TACGTCCGAG CAGCATCGCT GATCGGCGGG CTGGCGCTTG GCGCCGGTGT CGCACTGGTG
TCGGCGCCGG GCCAAGGCTT CCTTGAGTTC GCGCGCGAGT CGTATCGCGA AGTTCGCAAG
GTGGTCTGGC CGACGCGCAA GGAAGCTGGG CAGATGACCG GCCTGGTGTT CGCTTTCGTG
GTGATCATGG CCGTGTTCCT GTGGTCTGCG GACAAGCTCA TCGAGTGGGT CATTTTCTCG
CTCGTGTTGG GCTGGAAATA A
|
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| Protein sequence | MANPNVETVN PSSGKWLLVV AFLLVVAGVI GFYLLAQQPG YVRAASLIGG LALGAGVALV
SAPGQGFLEF ARESYREVRK VVWPTRKEAG QMTGLVFAFV VIMAVFLWSA DKLIEWVIFS
LVLGWK
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