Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3036 |
Symbol | rplJ |
ID | 1221890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3268484 |
End bp | 3268990 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637239444 |
Product | 50S ribosomal protein L10 |
Protein accession | NP_521157 |
Protein GI | 17547755 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0878547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACTCA ATCTCGAAGA TAAGAAGGCC GTCGTGGCCG AGGTGACGGC GCAAGTCGCC AAGGCCTCGA CCATCGTCGT TGCTGAATAT CGCGGTATCA CGGTTGGCGA TCTGACCAAG CTGCGTGCAC AGGCACGCCA GCAAGGCGTC TACCTGCGCG TTCTGAAGAA CACGCTGGCA CGCCGCGCTG TGGAAGGCAC GCCGTTTGCT GAACTCGCCG AGCAAATGAC CGGCCCGCTG ATCTACGGTA TTTCCGAAGA TGCAGTGGCC CCGGCCAAGG TGCTCAACGA CTTCGCAAAG GGCAATGACA AGCTGGTGCT GCGCGCCGGT TCGTACGAAG GCAAGGTGCT CGATGCTGCT GGCGTGAAGG CGCTGGCGTC GATCCCGAGC CGCGAAGAAC TGCTCAGCAA GCTGCTGTTC GTCATGCAGG CGCCGGTGTC GGGCTTTGCC CGCGCTCTGG CCGCCCTGGC CGAGAAGAAG CAGAGCGAAG AAGGCGCCGC CGCCTGA
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Protein sequence | MALNLEDKKA VVAEVTAQVA KASTIVVAEY RGITVGDLTK LRAQARQQGV YLRVLKNTLA RRAVEGTPFA ELAEQMTGPL IYGISEDAVA PAKVLNDFAK GNDKLVLRAG SYEGKVLDAA GVKALASIPS REELLSKLLF VMQAPVSGFA RALAALAEKK QSEEGAAA
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