Gene RSc3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3036 
SymbolrplJ 
ID1221890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3268484 
End bp3268990 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID637239444 
Product50S ribosomal protein L10 
Protein accessionNP_521157 
Protein GI17547755 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0878547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCA ATCTCGAAGA TAAGAAGGCC GTCGTGGCCG AGGTGACGGC GCAAGTCGCC 
AAGGCCTCGA CCATCGTCGT TGCTGAATAT CGCGGTATCA CGGTTGGCGA TCTGACCAAG
CTGCGTGCAC AGGCACGCCA GCAAGGCGTC TACCTGCGCG TTCTGAAGAA CACGCTGGCA
CGCCGCGCTG TGGAAGGCAC GCCGTTTGCT GAACTCGCCG AGCAAATGAC CGGCCCGCTG
ATCTACGGTA TTTCCGAAGA TGCAGTGGCC CCGGCCAAGG TGCTCAACGA CTTCGCAAAG
GGCAATGACA AGCTGGTGCT GCGCGCCGGT TCGTACGAAG GCAAGGTGCT CGATGCTGCT
GGCGTGAAGG CGCTGGCGTC GATCCCGAGC CGCGAAGAAC TGCTCAGCAA GCTGCTGTTC
GTCATGCAGG CGCCGGTGTC GGGCTTTGCC CGCGCTCTGG CCGCCCTGGC CGAGAAGAAG
CAGAGCGAAG AAGGCGCCGC CGCCTGA
 
Protein sequence
MALNLEDKKA VVAEVTAQVA KASTIVVAEY RGITVGDLTK LRAQARQQGV YLRVLKNTLA 
RRAVEGTPFA ELAEQMTGPL IYGISEDAVA PAKVLNDFAK GNDKLVLRAG SYEGKVLDAA
GVKALASIPS REELLSKLLF VMQAPVSGFA RALAALAEKK QSEEGAAA