| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3025 |
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| Symbol | recQ |
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| ID | 1221879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3245533 |
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| End bp | 3247446 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637239433 |
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| Product | ATP-dependent DNA helicase protein |
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| Protein accession | NP_521146 |
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| Protein GI | 17547744 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0062287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0101494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT CTCCCGCCAT TGACCACGCG CTCGACGCGT TGCCCGAAGA TACGGCCGCC
GCCACGCGCG CCGTGCTGCA CGACGTGTTC GGCTACAGCG CGTTCCGCGG GCCGCAGGCG
GACATCGTTG CCCACGTCGC CGACGGCGGC GATTGCCTGG TGCTGATGCC CACCGGCGGC
GGCAAGTCGC TCTGTTATCA GATTCCCGCC CTGGTGCGGC ACCGGCGCGG CCAGGGCGCG
GGCATCGTGG TCTCGCCGCT GATCGCCCTG ATGCAGGACC AGGTGGCCGC GCTGGAAGAG
GCCGGTGTGC GCGCCGCCTA CCTCAATTCC GCGCTCAGCG GCGCCGAGGC CGCGCAGGTC
GAGCGCGATC TGGCGGCCGG CCGGCTCGAT CTCGTCTACG TCGCGCCCGA ACGGCTGATG
ACGCCGCGCT TCCTCGAACT GCTGGAGCGC TCGCGCATCG GCCTGTTCGC CATCGATGAG
GCGCATTGCG TGTCGCAGTG GGGGCACGAT TTCCGGCCGG AGTACATCCA GCTCTCCGTG
CTGCACGAGC GCTTCCCGCA CGTGCCGCGC ATCGCGCTGA CCGCCACCGC CGACGCCGTC
ACGCGCGACG AGATCGTCGA GCGGCTGGCG CTGGGCGGCG CCCGCGTCTT CCTCTCCAGC
TTCGACCGCC CCAACATCCG CTACACCATC GTCGAGAAGG ACAGCGCGCG CCAGCAGCTG
CTGCGCTTCA TCCGCGCCGA GCACCTCGGC GAAGACGGCT GCGACGCCGG CATCATCTAT
TGTCTGTCGC GCAAGAAGGT GGAAGAGACC GCGCAGTGGC TGGCCGAGCA GGGCCTCCGC
GCGCTGCCCT ACCACGCCGG CATGGACGCC GAGACGCGCG CCCGCCACCA GGCCATCTTC
CGTAAGGAGG AGGGCGTGGT GATGGTGGCG ACCATCGCCT TCGGCATGGG CATCGACAAG
CCGGACGTGC GCTTCGTCGC CCATCTGGAC TTGCCCAAGA GCCTGGAGGG CTACTACCAG
GAAACCGGCC GCGCCGGCCG CGACGGCCTG CCCGCCAACG CGTGGATGGC CTACGGCCTG
GCCGATGTGG TGCAGCAGCG CCGCATGATC GACGAGTCCG ACGCCGACGA CGTGCACAAG
CGTGTCTCGA CGGCCAAGCT CGATGCGCTG CTGGGGCTGT GCGAGTCGGC GGGATGCCGC
CGCGTGGCCC TGCTGGCGTA TTTCGGCGAG TCCAGCGAGC CTTGCGGCAA CTGCGACACC
TGCCTGAGCC CGCCGCAGAC CTGGGACGCG ACCCGCGAGG CGCAGATGGC GCTGTCGTGC
GTGTACCGCG TGCAGCAGGC CAGCCGCGTG AGCTTCGGCG CCGGCCAACT GATCGACATC
CTGCGCGGCA ACGCCACCGA GCGCATCAAG CAATGGCATC ACGAGACGCT GTCCACTTTC
GGCATCGGCA ACGCCCTGTC GGAGCGCGCG TGGCGCGGCG TGTTCCGCCA GCTGGTGGCG
CAGGGGCTGC TGGCGGTCGA TCACGGCGGC CATGGCGCCC TGGTGCTGAC CGACGCCGCG
CGCCCGGTGC TCAAGGGCGC GCAGCATGTG ACCTTGCGGC GCCAGGCGGA GAAGGTGCGT
GCCGCGCCCG CGTCCGGCGC CAAGTCCGAG CGTCGCGCGG ATCCCGCCGC GGAGCTATCG
GCCGAGGCCC AGGTGCGCTG GCAGGCACTG CGCGTCTGGC GGGCCCAGAC CGCGCGCGAG
CACAGCGTGC CCGCCTATGT GATCTTCCAT GACGCCACGC TCGCCCGCAT CGCCGAATCC
GATCCCGCTT CGCGCGACGC GCTCGCCGAG CTGCCCGGCA TCGGTGTCGC CAAGCTGGAC
CGTTACGGCC AGGCCTTGCT CGACGTGCTG GCCAAGTGCC GGGGCGAGGT CTAG
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| Protein sequence | MFDSPAIDHA LDALPEDTAA ATRAVLHDVF GYSAFRGPQA DIVAHVADGG DCLVLMPTGG
GKSLCYQIPA LVRHRRGQGA GIVVSPLIAL MQDQVAALEE AGVRAAYLNS ALSGAEAAQV
ERDLAAGRLD LVYVAPERLM TPRFLELLER SRIGLFAIDE AHCVSQWGHD FRPEYIQLSV
LHERFPHVPR IALTATADAV TRDEIVERLA LGGARVFLSS FDRPNIRYTI VEKDSARQQL
LRFIRAEHLG EDGCDAGIIY CLSRKKVEET AQWLAEQGLR ALPYHAGMDA ETRARHQAIF
RKEEGVVMVA TIAFGMGIDK PDVRFVAHLD LPKSLEGYYQ ETGRAGRDGL PANAWMAYGL
ADVVQQRRMI DESDADDVHK RVSTAKLDAL LGLCESAGCR RVALLAYFGE SSEPCGNCDT
CLSPPQTWDA TREAQMALSC VYRVQQASRV SFGAGQLIDI LRGNATERIK QWHHETLSTF
GIGNALSERA WRGVFRQLVA QGLLAVDHGG HGALVLTDAA RPVLKGAQHV TLRRQAEKVR
AAPASGAKSE RRADPAAELS AEAQVRWQAL RVWRAQTARE HSVPAYVIFH DATLARIAES
DPASRDALAE LPGIGVAKLD RYGQALLDVL AKCRGEV
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