| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3021 |
|---|
| Symbol | tuf |
|---|
| ID | 1221875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3240561 |
|---|
| End bp | 3241751 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637239429 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | NP_521142 |
|---|
| Protein GI | 17547740 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000542381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00818484 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG AAAAGTTCGA GCGGACCAAG CCGCACGTGA ACGTTGGGAC GATCGGTCAC
GTTGACCACG GCAAGACGAC GCTGACGGCA GCAATCGCGA CGGTGCTGTC GAGCAAGTTC
GGTGGCGAAG CGAAGAAGTA CGACGAAATC GACGCAGCAC CGGAAGAAAA GGCACGCGGC
ATCACGATCA ACACCGCGCA CATCGAGTAC GAAACGGCCA ACCGCCACTA CGCACACGTC
GACTGCCCGG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCCGC CCAGATGGAC
GGCGCCATCC TGGTGTGCTC GGCCGCTGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCCC GCCAGGTCGG CGTGCCGTAC ATCATCGTCT TCCTGAACAA GTGCGACATG
GTGGACGACG CTGAGCTGCT GGAACTGGTC GAAATGGAAG TGCGCGAGCT GCTCTCCAAG
TACGACTTCC CGGGCGACGA CACCCCGATC ATCAAGGGTT CGGCCAAGCT GGCGCTGGAA
GGCGACAAGG GCGAGCTGGG CGAAGTGGCC ATCATGAACC TGGCCGACGC ACTGGACTCG
TACATCCCGA CGCCGGAGCG CGCTGTTGAC GGCACGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAGCGCGG CATCATCAAG
GTCGGCGAAG AAATCGAAAT CGTCGGCATC AAGGCCACGC AGAAGACCAC CTGCACCGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCTG GCGACAACGT CGGTATCCTG
CTGCGCGGCA CCAAGCGCGA AGACGTCGAG CGCGGCCAAG TGCTGTGCAA GCCGGGTTCG
ATCAAGCCGC ACACGCACTT CACCGGCGAG GTCTACATCC TGTCGAAGGA CGAAGGTGGT
CGTCACACCC CGTTCTTCAA CAACTATCGC CCGCAGTTCT ATTTCCGCAC GACCGACGTG
ACCGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTCA TGCCCGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GCCTGCGCTT CGCCATCCGT
GAAGGCGGTC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
|
|---|
| Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSSKF GGEAKKYDEI DAAPEEKARG
ITINTAHIEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI IKGSAKLALE
GDKGELGEVA IMNLADALDS YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIIK
VGEEIEIVGI KATQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLCKPGS
IKPHTHFTGE VYILSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE
|
|---|
| |