| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3020 |
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| Symbol | rpsJ |
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| ID | 1221874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3240141 |
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| End bp | 3240455 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239428 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | NP_521141 |
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| Protein GI | 17547739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000044729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00550197 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGCAGA ACCAGAAGAT CCGTATCCGC CTGAAGGCTT TCGACTATCG CCTGATCGAC
CAGTCGGCCG CCGAGATCGT CGAGACCGCC AAGCGCACCG GCGCGATCGT CAAGGGCCCG
GTGCCCCTGC CGACCCGCAT CCAGCGTTTC GACGTCCTGC GCTCGCCGCA CGTCAACAAG
ACCAGCCGCG ACCAGTTCGA AATCCGCACC CACCAGCGCC TGATGGACAT CGTCGATCCG
ACCGACAAGA CCGTCGACGC GCTGATGAAG CTGGATCTGC CGGCTGGCGT GGATGTCGAG
ATCAAGCTGC AGTAA
|
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| Protein sequence | MQQNQKIRIR LKAFDYRLID QSAAEIVETA KRTGAIVKGP VPLPTRIQRF DVLRSPHVNK
TSRDQFEIRT HQRLMDIVDP TDKTVDALMK LDLPAGVDVE IKLQ
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