Gene RSc3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3019 
SymbolrplC 
ID1221873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3239191 
End bp3239853 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637239427 
Product50S ribosomal protein L3 
Protein accessionNP_521140 
Protein GI17547738 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.16849e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0059333 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTTG GCCTTGTAGG TCGCAAGGTT GGCATGACCC GTGTTTTCAC GGATGACGGC 
GATTCGATTC CCGTCACCGT GCTCGAGGTC GGCGGCAACC GCGTGACGCA AATCAAGACG
GACGAGACCG ACGGTTACAC CGCGGTACAA GTCACCTTCG GCACCCGACG CGCCAGCCGC
GTCACCAAGC CGCTGGCGGG CCACCTCGCC AAAGCCGGCG TGGAAGCCGG TGAAATCATC
GTCGAATTCC GCATCGACGC CACCAAAGCC GCTGAGCTGA AGCTCGGCGA CACCATCGAC
GTGGACCTGT TCTCGGTTGA CCAGAAGATC GACGTGCAAG GCACGACGAT CGGTAAGGGC
TATGCCGGTA CGATCAAGCG CTACCACTTC TCGTCGGGCC GTGCCTCGCA CGGTAACTCC
CGTTCGCACA ATGTGCCGGG TTCGATCGGT ATGGCGCAGG ATCCGGGCCG CGTGTTCCCG
GGTAAGCGCA TGACCGGTCA TATGGGTGAC GTCACCCGTA CGGTGCAGAA CCTGGTGATC
GTTCGCATCG ACGCAGAGCG CAAGCTGCTG CTCGTCAAGG GCGCCGTTCC GGGCGCGAAG
AGCGGTTTTG TTGTCGTCAG TCCGGCCGTC AAGGCCAAGC CGCAAGTTGC GGCTGCAGCG
TAA
 
Protein sequence
MSLGLVGRKV GMTRVFTDDG DSIPVTVLEV GGNRVTQIKT DETDGYTAVQ VTFGTRRASR 
VTKPLAGHLA KAGVEAGEII VEFRIDATKA AELKLGDTID VDLFSVDQKI DVQGTTIGKG
YAGTIKRYHF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD VTRTVQNLVI
VRIDAERKLL LVKGAVPGAK SGFVVVSPAV KAKPQVAAAA