| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3010 |
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| Symbol | rpsQ |
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| ID | 1221864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3235081 |
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| End bp | 3235350 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637239418 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | NP_521131 |
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| Protein GI | 17547729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000740755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0471511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAG CCGCAACGTC CCTGAAGCGC ACGCTCGTTG GCCGCGTTGT CAGCAGCAAG
ATGGACAAGA CCGTGACGGT CCTGGTCGAG AACCGTGTCA AGCATCCGCT GTACGGCAAG
TACGTGGTGC GCTCCAAGAA GTACCATGCG CACGACGAAG CCAACCAGTA CAAGGAAGGC
GACCGTGTCG AGATCGTGGA ATCGCGTCCG ATCTCCCGTA CCAAGGCCTG GGTGGTGTCG
CGTCTGGTGG AAGCCGCACG CGTGATCTAA
|
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| Protein sequence | MTEAATSLKR TLVGRVVSSK MDKTVTVLVE NRVKHPLYGK YVVRSKKYHA HDEANQYKEG
DRVEIVESRP ISRTKAWVVS RLVEAARVI
|
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