| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3005 |
|---|
| Symbol | rpsH |
|---|
| ID | 1221859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3232818 |
|---|
| End bp | 3233213 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637239413 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | NP_521126 |
|---|
| Protein GI | 17547724 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00104823 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0533117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA GCGATCCGAT CGCCGATATG TTGACGCGTA TTCGCAACGC GCAAGCGGTG
GAAAAAGCGT CGGTGGTCAT GCCGTCGTCG AAGCTGAAGG TGGCCATCGC CAAGGTCCTG
AAGGACGAAG GCTACATCGA CGATTTCGCC GTGACCGAGC AGGGTGGCAA GGCCTCCCTC
ACGATTGGTC TGAAGTATTA CGCCGGCCGT CCGGTCATCG AGCGCCTGGA GCGCGTCTCG
AAGCCGGGCC TGCGCGTGTA CAAGGGCCGT AACGAAATCC CGCAAGTGAT GAACGGCCTG
GGCGTCGCGA TCATCTCGAC CCCGCAAGGT CTGATGACGG ACCGCCGTGC GCGCGCGACC
GGTGTCGGTG GCGAAGTCAT TTGCTATGTC GCCTAA
|
|---|
| Protein sequence | MSMSDPIADM LTRIRNAQAV EKASVVMPSS KLKVAIAKVL KDEGYIDDFA VTEQGGKASL
TIGLKYYAGR PVIERLERVS KPGLRVYKGR NEIPQVMNGL GVAIISTPQG LMTDRRARAT
GVGGEVICYV A
|
|---|
| |