Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3003 |
Symbol | rplR |
ID | 1221857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3231905 |
End bp | 3232261 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637239411 |
Product | 50S ribosomal protein L18 |
Protein accession | NP_521124 |
Protein GI | 17547722 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0984872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0535953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA ATGACTCTCG TTTGCGCCGT GCACGTCAGA CCCGCCTGAA GATTGCGGAG CTGAATGTTG CTCGCCTGGC CGTGCACCGT ACCAATCTGC ACATCTATGC GCAGGTCTTC TCTGAAGACG GCACCAAGGT CCTGGCCTCG GCCTCGACGG CGGAAGCCGA AGTCCGCAAG GAACTGAACG GCAACGGTGG CAACACCGCC GCCGCTACCC TGGTGGGCAA GCGTATCGCC GAAAAGGCGA AGGCTGCCGG CATCGAAGCA GTGGCGTTCG ATCGCTCGGG TTTCCGTTAT CACGGTCGCG TGAAGGCCCT GGCCGACGCG GCTCGCGAAG CTGGCCTGAA ATTCTAA
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Protein sequence | MNKNDSRLRR ARQTRLKIAE LNVARLAVHR TNLHIYAQVF SEDGTKVLAS ASTAEAEVRK ELNGNGGNTA AATLVGKRIA EKAKAAGIEA VAFDRSGFRY HGRVKALADA AREAGLKF
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