Gene RSc3000 details

Gene Information

• Locus tag: RSc3000
• Symbol: rplO
• ID: 1221854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 3230710
• End bp: 3231141
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637239408
• Product: 50S ribosomal protein L15
• Protein accession: NP_521121
• Protein GI: 17547719
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0225964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.0517579
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACTGA ATAACCTGAA GCCGGCAGCC GGCTCCAAGC ACGCCAAGCG CCGCGTCGGT 
CGTGGTATCG GCTCGGGCTT GGGCAAGACG GCTGGTCGTG GTCACAAGGG TCAGAAGTCG 
CGTTCGGGTG GTTTCCACAA GGTCGGCTTT GAAGGTGGCC AAATGCCCCT GCATCGTCGT 
CTGCCGAAGC GTGGTTTCAC TTCGCTGACC AAGGAATTCA CCGCGGAAGT GCGCCTGGGC 
GACCTGGCGG GCCTGCCGGT CGCTGAAATC GACCTGCTGA CCCTGAAGCA AGCCGGTCTG 
GTGGGCGAGC TGGTCAAGAG CGCCAAGGTG ATCCTGTCGG GCTCGATCGA CAAGAAGGTG 
ACCCTGAAGG GCCTGGGCGC GACGGCTGGG GCGAAGGCCG CAATCGAAGC GGCTGGTGGC 
TCGCTGGCGT AA 

 

Protein sequence

MQLNNLKPAA GSKHAKRRVG RGIGSGLGKT AGRGHKGQKS RSGGFHKVGF EGGQMPLHRR 
LPKRGFTSLT KEFTAEVRLG DLAGLPVAEI DLLTLKQAGL VGELVKSAKV ILSGSIDKKV 
TLKGLGATAG AKAAIEAAGG SLA