Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2987 |
Symbol | |
ID | 1221841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3220404 |
End bp | 3221063 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239395 |
Product | oxidoreductase cytochrome C-type signal peptide protein |
Protein accession | NP_521108 |
Protein GI | 17547706 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TCGCGAACGT TCTTGCTGTC GCAGCGCTGT CCCTGGCATC GGCCCTCCCG CTGGCCCATG CCGAAGAGCC AAAGGTCGCC AAAGCCGATG CCGCGCGCGG CGAGACGCTC TTCAACACCG GAGTCCCCGC CAACGGCGTG CCCGCCTGCA CCAGCTGCCA CGGCCCCGGC GGCAACAGCA CGGCGAACGC CAACCCGAAG CTGGCCGGCC AGCACGCGGC ATACATCGAG AAGCAGCTGA AGGATTTCAA GGCCAAGACC GAGCGCAACC AGCCGGTAAT GTCGCTGTAC GCAGGCGCGC TGTCCGACCA GGACATGAAG GACATCGGCG CCTACATCGC CAAGCAACCG GCCTGGAAGC CGAGCTCGGC CAAGAACAAG GACACCATCG AACTCGGCCA GAAGCTGTAC CGCGGCGGTG ATGCCAAGCG CGGCATCGCG GCCTGCGCGG GCTGCCACGG CCCGGCCGGG GCCGGTATTC CGGCGCAGTA TCCGCGCATC GGCGGCCAGT TTGCCGAGTA CACCGAGGCG CAGCTGGTCG CGTTCCAGAA CGGCAGCCGC AGCAACAGCG TTCAGATGCA CGATCTGGCC GGGCGCATGA CGGCGCTGCA GATCAAGGCC GTGGCCGACT ACATCGCCGG CCTGCGCTGA
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Protein sequence | MIRIANVLAV AALSLASALP LAHAEEPKVA KADAARGETL FNTGVPANGV PACTSCHGPG GNSTANANPK LAGQHAAYIE KQLKDFKAKT ERNQPVMSLY AGALSDQDMK DIGAYIAKQP AWKPSSAKNK DTIELGQKLY RGGDAKRGIA ACAGCHGPAG AGIPAQYPRI GGQFAEYTEA QLVAFQNGSR SNSVQMHDLA GRMTALQIKA VADYIAGLR
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