Gene RSc2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2987 
Symbol 
ID1221841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3220404 
End bp3221063 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID637239395 
Productoxidoreductase cytochrome C-type signal peptide protein 
Protein accessionNP_521108 
Protein GI17547706 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TCGCGAACGT TCTTGCTGTC GCAGCGCTGT CCCTGGCATC GGCCCTCCCG 
CTGGCCCATG CCGAAGAGCC AAAGGTCGCC AAAGCCGATG CCGCGCGCGG CGAGACGCTC
TTCAACACCG GAGTCCCCGC CAACGGCGTG CCCGCCTGCA CCAGCTGCCA CGGCCCCGGC
GGCAACAGCA CGGCGAACGC CAACCCGAAG CTGGCCGGCC AGCACGCGGC ATACATCGAG
AAGCAGCTGA AGGATTTCAA GGCCAAGACC GAGCGCAACC AGCCGGTAAT GTCGCTGTAC
GCAGGCGCGC TGTCCGACCA GGACATGAAG GACATCGGCG CCTACATCGC CAAGCAACCG
GCCTGGAAGC CGAGCTCGGC CAAGAACAAG GACACCATCG AACTCGGCCA GAAGCTGTAC
CGCGGCGGTG ATGCCAAGCG CGGCATCGCG GCCTGCGCGG GCTGCCACGG CCCGGCCGGG
GCCGGTATTC CGGCGCAGTA TCCGCGCATC GGCGGCCAGT TTGCCGAGTA CACCGAGGCG
CAGCTGGTCG CGTTCCAGAA CGGCAGCCGC AGCAACAGCG TTCAGATGCA CGATCTGGCC
GGGCGCATGA CGGCGCTGCA GATCAAGGCC GTGGCCGACT ACATCGCCGG CCTGCGCTGA
 
Protein sequence
MIRIANVLAV AALSLASALP LAHAEEPKVA KADAARGETL FNTGVPANGV PACTSCHGPG 
GNSTANANPK LAGQHAAYIE KQLKDFKAKT ERNQPVMSLY AGALSDQDMK DIGAYIAKQP
AWKPSSAKNK DTIELGQKLY RGGDAKRGIA ACAGCHGPAG AGIPAQYPRI GGQFAEYTEA
QLVAFQNGSR SNSVQMHDLA GRMTALQIKA VADYIAGLR