Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2969 |
Symbol | aroB |
ID | 1221823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3201298 |
End bp | 3202404 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239377 |
Product | 3-dehydroquinate synthase |
Protein accession | NP_521090 |
Protein GI | 17547688 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.351532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCG TTGATGTCGA CCTGGGCGAG CGCGCCTATC CGATCCATAT CGGAACCGGG CTCCTGTCCC AAGCCGAACT GTTTGCCCCC CATATCCGCG GCACCCGTGC CGTGATCGTC ACCAATGAGA CGGTGGCGCC GCTCTATGCC GCTCGGGTCG AAGCCGCGAT CCGCTCGCTG GGCAAGACCG TCGACATGGT GGTGCTGCCC GACGGTGAAT CGTTCAAGAC GTGGGAGACG CTCAACCGGA TCTTCGATGC ACTCCTGGCC TCGGGCGCTG ACCGCAAGAC CACCCTCGTG GCGCTCGGCG GAGGGGTGAT CGGCGACATG ACCGGATTTG CCGCCGCCAG CTATATGCGC GGCGTGCCGT TCATCCAGGT GCCGACCACG TTGCTGTCCC AGGTCGATTC GTCGGTGGGG GGCAAGACCG GGATCAATCA CCCGCTCGGC AAGAACATGA TCGGTGCGTT CCACCAACCG CAGGCGGTGC TGGCCGACAT CGACACGCTG CGCACGCTGC CGCCGCGCGA GCTCGCCGCC GGCATGGCCG AAGTCATCAA GCATGGCGCG ATCGCCGATG CCGACTACTT CGCCTGGATC GAGCGCCACA TTGCCGGCCT CAATGCTTGC GATGCCGACC TGATGGCAGG AGCCGTGCGC GGCTCGGTGC AGATCAAGGC GGCCGTGGTG GCACAGGACG AGCGCGAGTC CGGTCTGCGC GCCATCCTCA ACTTCGGCCA CACCTTCGGC CACGCCATCG AAGCGGGCCT GGGGTACGGC GAATGGCTGC ACGGCGAGGC TGTCGGCTGC GGCATGGCGA TGGCGGCGGA TCTGTCGCAC CGGCTCGGGT TCATCGACAT CGATACGCGC AACCGCGTGA CGGCGCTGAC ACGCGCGGCC AACCTGCCGG TGGTGGCGCC CGATCTGGGC GTGGCGCGCT TCATCGACCT GATGCGCGTC GACAAGAAGG CCGAGGCGGG CGAGATCAAG TTCGTCCTGC TGCGCAAGCT GGGCCAAGCG TTCGTGACCA CGGTACCCGA CACCGACCTG CGCGCCACGC TGCAGCATGC CGTGCTGCGT CCGCCCACCG AAGCGCCGGT GGCCTGA
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Protein sequence | MITVDVDLGE RAYPIHIGTG LLSQAELFAP HIRGTRAVIV TNETVAPLYA ARVEAAIRSL GKTVDMVVLP DGESFKTWET LNRIFDALLA SGADRKTTLV ALGGGVIGDM TGFAAASYMR GVPFIQVPTT LLSQVDSSVG GKTGINHPLG KNMIGAFHQP QAVLADIDTL RTLPPRELAA GMAEVIKHGA IADADYFAWI ERHIAGLNAC DADLMAGAVR GSVQIKAAVV AQDERESGLR AILNFGHTFG HAIEAGLGYG EWLHGEAVGC GMAMAADLSH RLGFIDIDTR NRVTALTRAA NLPVVAPDLG VARFIDLMRV DKKAEAGEIK FVLLRKLGQA FVTTVPDTDL RATLQHAVLR PPTEAPVA
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