Gene RSc2930 details

Gene Information

• Locus tag: RSc2930
• Symbol: mscL
• ID: 1221784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 3160747
• End bp: 3161172
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637239338
• Product: large-conductance mechanosensitive channel
• Protein accession: NP_521051
• Protein GI: 17547649
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTAA TGCAAGATTT CAAGAAATTC GCAATGCGCG GCAACGTGAT CGACTTGGCG 
GTCGGTGTGA TCATCGGTGC GGCGTTTGGC AAGATCGTCG ACTCGCTGGT CAACGACCTG 
ATCATGCCGC TGGTTGCGCG CATCGTCGGC AAGCTCGATT TCTCGAATCT GTTCATTCAA 
CTGGCCGATG CACCCGCGGG CGTGCCACAG ACGCTGGCCG ACCTGAAGAA AGCGGGCGTG 
CCGGTCTTCG CCTACGGCAA CTTCATCACG GTCGCCGTCA ACTTCCTGAT CCTGGCCTTC 
ATCGTGTTCC TGATGGTGCG CGCGATCACC CGCGTGATCG ACACCAACCC GCCGCCGGCC 
GACACGCCGG AAAACACGCT GCTGCTGCGC GATATCCGCG ACAGCCTGAA ATCCAAGAAT 
CAATAA 

 

Protein sequence

MALMQDFKKF AMRGNVIDLA VGVIIGAAFG KIVDSLVNDL IMPLVARIVG KLDFSNLFIQ 
LADAPAGVPQ TLADLKKAGV PVFAYGNFIT VAVNFLILAF IVFLMVRAIT RVIDTNPPPA 
DTPENTLLLR DIRDSLKSKN Q