| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2916 |
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| Symbol | cyoB1 |
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| ID | 1221769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3141803 |
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| End bp | 3143782 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239323 |
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| Product | transmembrane cytochrome O ubiquinol oxidase subunit I |
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| Protein accession | NP_521037 |
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| Protein GI | 17547635 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.374086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.149288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGCA AGTTGAGTCT GGAGGCCATT CCGCTGCACG AGCCCATCGT GGTCGTGACA
GTGTCGGCCA TTCTGCTGGG TGGCGCCGGC CTGTTTGGCC TGATCACCTA CTTCAAGAAG
TGGTCGTACC TTTGGAATGA GTGGATCACC TCGGTCGACC ACAAGAAGAT CGGCGTGATG
TATTGCATTC TGGCGATCGT GATGCTGCTG CGCGGCTTTG CCGACGCCAT CATGATGCGC
TCGCAACTGG CGCTCGCCTC GGGTGGTGGT GCCGGCTATC TGCCGCCCGA GCACTACGAC
CAGATCTTCA CCGCGCACGG CGTGATCATG ATCTTCTTCA TGGCCATGCC GCTGATGACG
GGCCTGATCA ACCTGATCGT GCCGCTGCAG ATCGGCGCGC GCGACGTGGC CTTCCCGTTC
CTGAACACGC TGTCGTTCTG GCTGGCGGCC GCGGGCGTGG TGCTGGTCAA CCTGTCGCTG
GGCGTCGGCA ACTTCGCGCG CACCGGCTGG CTGGCCTACC CGCCGCTGTC GGAGCTGGCC
TACAGCCCCG ACGTGGGGGT CGACTACTAC ATCTGGGCGC TGCAGATATC CGGGTTGGGC
ACCTTGCTGA CCGGGGTGAA CTTCGTCGCG ACCATCTTCA AGATGCGCGC GCCGGGCATG
ACGCTGATGC GCATGCCGAT CTTCACCTGG ACGGCCCTGT GCGCCAACAT CCTGATCGTG
GCGGCCTTTC CGGTGCTGAC CGTGGCGCTG GCGCTGCTGG GCCTGGACCG CTACCTGGAC
ATGCACTTCT TCACGAACAC GGCCGGCGGC AACGCCATGC TGTATGTGAA CCTGATCTGG
ATCTGGGGCC ACCCCGAGGT GTACATCCTG GTTCTGCCGG CATTCGGCAT GTTCTCGGAA
ATCATCTCGA CGTTCTCGCG CAAGAAGCTG TTCGGCTACA CGTCGATGGT GTACGCGACG
GCGGGCATCA CGGTGCTGTC GTTCCTGGTG TGGCTGCACC ACTTCTTCAC CATGGGCTCG
GGCGCGAACG TCAACGCGTT CTTCGGCATC GCCACCATGA TCATCTCCAT CCCGACCGGG
GTGAAGATCT TCAACTGGCT GTTCACGATG TACCGCGGCC GCGTCGAGTT CACCTCGCCG
GTGCTGTGGA CGATCGGCTT CATGATCACC TTCGTGATCG GCGGGATGAC CGGTGTGCTG
CTGGCGGTGC CGGGCGCCGA CTTCCTGCTG CACAACAGCC TGTTCCTGAT CGCCCACTTC
CATAACACCA TCATCGGTGG CGTGGTGTTC GGCTACCTGG CGGGCATCAC CTTCTGGTTC
CCGAAGGCCT TCGGCTTCAA GCTGGACGAG AAGTGGGGCA AGCGCGCCTT CTGGTGCTGG
TTCGTCGGCT TCTACCTGGC CTTCATGCCG CTGTACGTGC TGGGCTTCAT GGGCATGACG
CGCCGCCTGA ACCATACCGA CAACCCGGCT TGGCAGCCGT GGCTGATCGT CGCCGTGATC
GGCGCCGCGG TCATCGCCTG CGGTATCGCT TCGCAGCTCA TCCAGATCGT CGTCAGCATC
CGCAACCGCA AGGCACTGGC CGACGTGACC GGCGACCCGT GGGGCGGCCG CACGCTGGAG
TGGGCCACGT CGTCGCCGCC GGCGCACTAC AACTTCGCGA CCGTGCCGGT GGTGCGTGAC
ATCGACGCCT TCGCCGACAT GAAGGCGCGC GGCGAGGTGC CGACGCAGGT CGCCGCCAGC
TACGAGAAGA TCCACATGCC GAAGAACACC GGCGCCGGCT TCTTCATCGG CATGTTCTCG
ATCGTGATGG GCTTCGCCCT GGTGTGGCAC ATCTGGTGGA TGGCCGTGCT GGGTCTGGGC
GGCATGATCG TCAGCTTCAT CTTCCGCAGC AACAACGACG ACATCGATTA CTACGTGCCC
GCTCAAGAGG TTCATGAGAC CGAGTCGGCC TACTTCCAAC GCATCGGTTC GCAGGCTTAA
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| Protein sequence | MFGKLSLEAI PLHEPIVVVT VSAILLGGAG LFGLITYFKK WSYLWNEWIT SVDHKKIGVM
YCILAIVMLL RGFADAIMMR SQLALASGGG AGYLPPEHYD QIFTAHGVIM IFFMAMPLMT
GLINLIVPLQ IGARDVAFPF LNTLSFWLAA AGVVLVNLSL GVGNFARTGW LAYPPLSELA
YSPDVGVDYY IWALQISGLG TLLTGVNFVA TIFKMRAPGM TLMRMPIFTW TALCANILIV
AAFPVLTVAL ALLGLDRYLD MHFFTNTAGG NAMLYVNLIW IWGHPEVYIL VLPAFGMFSE
IISTFSRKKL FGYTSMVYAT AGITVLSFLV WLHHFFTMGS GANVNAFFGI ATMIISIPTG
VKIFNWLFTM YRGRVEFTSP VLWTIGFMIT FVIGGMTGVL LAVPGADFLL HNSLFLIAHF
HNTIIGGVVF GYLAGITFWF PKAFGFKLDE KWGKRAFWCW FVGFYLAFMP LYVLGFMGMT
RRLNHTDNPA WQPWLIVAVI GAAVIACGIA SQLIQIVVSI RNRKALADVT GDPWGGRTLE
WATSSPPAHY NFATVPVVRD IDAFADMKAR GEVPTQVAAS YEKIHMPKNT GAGFFIGMFS
IVMGFALVWH IWWMAVLGLG GMIVSFIFRS NNDDIDYYVP AQEVHETESA YFQRIGSQA
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