Gene RSc2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2864 
Symbol 
ID1221712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3086995 
End bp3088152 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID637239266 
ProductLeu/Ile/Val-binding signal peptide protein 
Protein accessionNP_520985 
Protein GI17547583 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC GCAGCATCAT CGGATGGCGC GCGACGCTCG TGGCGGGCGT GCTCGGCATG 
GCGGCCTTCG GCGCACAGGC CGAGACCGGC GTGACCAACG ACGCCATCAT CATCGGCCAG
TCCGCGGCCA TGAGCGGCCC GGCAGGCAAG CTCGGCCAGC AGATGAACCT GGGCGCCAAG
CTGTATTTCA AATCCATCAA CGCCGCCGGC GGCATCTACG GCCGCAAGAT CGAACTGAAG
GTGCTCGACG ACTTCTATGA GCCCGAGGCC GCCGAGCGCA ACACCAAGAC ACTGATCAAC
GACACCAAGG TGTTCGCCCT GTTCGGCTAT GTCGGCACGC CGACCAGCCT GGCGGCCCTC
AAGGTGGCCA ACCCGGCGGG CGTGCCCTTC TTCGCACCGT ATTCCGGCGC CATGGCGCTG
CGTGAGCCGT TCGCCCGCAA CGTCTTCCAC GTACGCGCCA GCTATAACGA CGAGACGGCA
GCCATCGTCC AGCAGATCCG CACCACGGGC CACAAGCGCG TGGCCGTGGT CTACAACGAT
GACAGCTACG GTGCCGCCGG CCTGGCGGGT GTCAAGCGTG CACTGGCGCT GCCCGAGAAC
AAGGCCGTGG CGCTCGCGGT GGAAGCCAGC GTGCCGCGCA ACAGCACCAC AGTGAAAGCC
GCATTGAGCA AGGTGCTCCC GAGCAAGGCC GACTCCGTCG TCGTCATCAG CACGTACCAG
ACCACGGCGG CGCTGGTGAA GGAAGCGCTG GCGGAGGGCT TCACGGGCCA GTTCTACAAC
GTATCGTTCG TCGGCACGAA GGAACTGGCG GATGCGCTGG GCTCGGCCGG TGGCGGCGTG
GTCGTCTCGC AAGTGATGCC CTTCCCGCAC AGCATGTCGT CGGCGCTGAC GCGCGACTAC
GAAAAGCTGC TCAAGGCCGA CGGCGTCACC TCGTTCGACT ACGGCAGCAT GGAAGGCTAT
ATCGCCGCGC GCATCTTCGT GGAAGGCCTC AAGCGCGCCG GCCGGGATCT GACGCGCGAG
AAGCTGATCA CCGCGCTCGA GACGATGGGC TCCACCGACC TTGGCGGCTT TGCGGTCAGC
TTCTCGCCGA CCAACCACGT CGCCTCGAAG TTCGTCGAGA TGACCGTCAT CAACTCGCAC
GGGCAAGTGA TCCGCTGA
 
Protein sequence
MQRRSIIGWR ATLVAGVLGM AAFGAQAETG VTNDAIIIGQ SAAMSGPAGK LGQQMNLGAK 
LYFKSINAAG GIYGRKIELK VLDDFYEPEA AERNTKTLIN DTKVFALFGY VGTPTSLAAL
KVANPAGVPF FAPYSGAMAL REPFARNVFH VRASYNDETA AIVQQIRTTG HKRVAVVYND
DSYGAAGLAG VKRALALPEN KAVALAVEAS VPRNSTTVKA ALSKVLPSKA DSVVVISTYQ
TTAALVKEAL AEGFTGQFYN VSFVGTKELA DALGSAGGGV VVSQVMPFPH SMSSALTRDY
EKLLKADGVT SFDYGSMEGY IAARIFVEGL KRAGRDLTRE KLITALETMG STDLGGFAVS
FSPTNHVASK FVEMTVINSH GQVIR