Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2864 |
Symbol | |
ID | 1221712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3086995 |
End bp | 3088152 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239266 |
Product | Leu/Ile/Val-binding signal peptide protein |
Protein accession | NP_520985 |
Protein GI | 17547583 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.110112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAC GCAGCATCAT CGGATGGCGC GCGACGCTCG TGGCGGGCGT GCTCGGCATG GCGGCCTTCG GCGCACAGGC CGAGACCGGC GTGACCAACG ACGCCATCAT CATCGGCCAG TCCGCGGCCA TGAGCGGCCC GGCAGGCAAG CTCGGCCAGC AGATGAACCT GGGCGCCAAG CTGTATTTCA AATCCATCAA CGCCGCCGGC GGCATCTACG GCCGCAAGAT CGAACTGAAG GTGCTCGACG ACTTCTATGA GCCCGAGGCC GCCGAGCGCA ACACCAAGAC ACTGATCAAC GACACCAAGG TGTTCGCCCT GTTCGGCTAT GTCGGCACGC CGACCAGCCT GGCGGCCCTC AAGGTGGCCA ACCCGGCGGG CGTGCCCTTC TTCGCACCGT ATTCCGGCGC CATGGCGCTG CGTGAGCCGT TCGCCCGCAA CGTCTTCCAC GTACGCGCCA GCTATAACGA CGAGACGGCA GCCATCGTCC AGCAGATCCG CACCACGGGC CACAAGCGCG TGGCCGTGGT CTACAACGAT GACAGCTACG GTGCCGCCGG CCTGGCGGGT GTCAAGCGTG CACTGGCGCT GCCCGAGAAC AAGGCCGTGG CGCTCGCGGT GGAAGCCAGC GTGCCGCGCA ACAGCACCAC AGTGAAAGCC GCATTGAGCA AGGTGCTCCC GAGCAAGGCC GACTCCGTCG TCGTCATCAG CACGTACCAG ACCACGGCGG CGCTGGTGAA GGAAGCGCTG GCGGAGGGCT TCACGGGCCA GTTCTACAAC GTATCGTTCG TCGGCACGAA GGAACTGGCG GATGCGCTGG GCTCGGCCGG TGGCGGCGTG GTCGTCTCGC AAGTGATGCC CTTCCCGCAC AGCATGTCGT CGGCGCTGAC GCGCGACTAC GAAAAGCTGC TCAAGGCCGA CGGCGTCACC TCGTTCGACT ACGGCAGCAT GGAAGGCTAT ATCGCCGCGC GCATCTTCGT GGAAGGCCTC AAGCGCGCCG GCCGGGATCT GACGCGCGAG AAGCTGATCA CCGCGCTCGA GACGATGGGC TCCACCGACC TTGGCGGCTT TGCGGTCAGC TTCTCGCCGA CCAACCACGT CGCCTCGAAG TTCGTCGAGA TGACCGTCAT CAACTCGCAC GGGCAAGTGA TCCGCTGA
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Protein sequence | MQRRSIIGWR ATLVAGVLGM AAFGAQAETG VTNDAIIIGQ SAAMSGPAGK LGQQMNLGAK LYFKSINAAG GIYGRKIELK VLDDFYEPEA AERNTKTLIN DTKVFALFGY VGTPTSLAAL KVANPAGVPF FAPYSGAMAL REPFARNVFH VRASYNDETA AIVQQIRTTG HKRVAVVYND DSYGAAGLAG VKRALALPEN KAVALAVEAS VPRNSTTVKA ALSKVLPSKA DSVVVISTYQ TTAALVKEAL AEGFTGQFYN VSFVGTKELA DALGSAGGGV VVSQVMPFPH SMSSALTRDY EKLLKADGVT SFDYGSMEGY IAARIFVEGL KRAGRDLTRE KLITALETMG STDLGGFAVS FSPTNHVASK FVEMTVINSH GQVIR
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