| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2857 |
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| Symbol | fadD1 |
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| ID | 1221705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3075262 |
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| End bp | 3076971 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239259 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | NP_520978 |
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| Protein GI | 17547576 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAC CGTGGCTGAA GCACTATCCC CCCGGGGTCC CCGCCGAGAT CGACGCGTCG
CAGTACCGAT CCCTGGCGCA TCTGCTTGAA GATTCCTTCC AGAAGAACCG TGACCACCGC
GCCCTCGAGT GCATGGGCAA GGTGCTGACC TACGGCGAAG TCGATGCGCT GTCGCGCCAG
TTGGCGGCGT GGCTGCAGTC CCGGGGCCTG GTGCCCGGCG CGCGTGTCGC GCTGATGATG
CCCAACGTGC TGCAGTATCC GGTGGCGCTG GCCGCCGTGC TGCGCGCCGG CTACGTGGTC
GTCAACGTCA ACCCGCTCTA CACCCCGCGC GAACTGGAGC ACCAGCTCAA GGACAGCGGC
GCGGAAGCCA TCGTCATCCT GGAGAACTTC GCGACCACGC TGCAGCAGGT GCTGCCGAAC
ACGCCGGTCA AGCACATCGT CGTGGCCAGC ATGGGCGACC TGCTGGGCGG GCTGAAGGGC
ATGCTGGTCA ATTTCGTCGT GCGCAGCGTC AAGAAGATGG TGCCGGCGTG GGAACTGCCC
AACTGCATCC GCTTCAACAC CGCGCTGGAG GCGGGCGCCA GGCTGGCGCT CAAGCCCACC
GCGGTCGGCC CCGACGATAT CGCCTTCCTG CAATACACCG GCGGTACCAC CGGCGTCTCC
AAAGGCGCGA CGCTGCTGCA CCGGAACATC GTCGCCAATG TGCTGCAGTC GGAGGCGTGG
ATGCAGCCGG GGCTCGACAA GCCGGCTCAC GACGGCAGCC GGCTGGCGCC CGGCGATGAG
GTCGTCACCA TCACCGCGCT GCCGCTGTAT CACATCTTCG CGCTGACGGT GTGCTGCCTG
CTGTCGATGC GCAAGGGCGG CCTGGCGGTG CTGATCCCCA ACCCGCGCGA CATCCCGGGC
TTCATCAAGG TGCTCAAGCG GTACCGCTTC CACATGTTCC CGGCGGTCAA CACGCTGTAC
AACGCGCTGC TCAACCATCC CGAGTTCGCC AGCGTGGACT GCTCGCGCCT GCGCGTGGCC
AACGGCGGCG GCATGGCGGT GCAGGAAGCG GTGGCCAAGA AGTGGCTCGA GGTGACCGGC
TGCCCGATCA TCGAAGGCTA CGGGCTGTCC GAAACCTCGC CTTCGGCCAC CTGCAACCCG
ACCGATACCG ATGTCTTCTC GGGCACGATC GGGGTGCCGC TGCCGTCCAC CGAGATCGCC
ATCCGCGACG ACGAAGGTCG CGACCAGCCC ATCGGCACGC CCGGCGAGAT CTGCCTTCGC
GGTCCGCAGG TCATGGCCGG CTACTGGAAG CGTCCCGACG AGACCGCCAA GGTCATGTAC
GCCGACGGCT TCTTCAAGAC CGGCGACGTG GGCGTGATGG ACGCGCGCGG CTACACCAAG
ATCGTCGACC GCAAGAAGGA CATGATCCTG GTGTCCGGCT TCAACGTGTA CCCGAACGAG
ATCGAGGGCG TGGTGGCGAT GTGCCCCGGC GTGCTGGAAG TCGCGGCCGT GGGCGTGCCC
GACGTGCACT CGGGCGAGGT GGTCAAGCTG TTCGTGGTGC GCCGAGACCC GTCGCTCACC
GAGGAGAGGC TGCTGGCGTT CTGCAAGGAG CAGCTCACCG GCTACAAGCG TCCCAAGTTC
ATCGAGTTCC GCAACGAGCT GCCGAAGACC AACGTCGGCA AGATTCTGCG CCGCGAACTG
CGCGACGAGG CGATGAAGAA GCGCGCGTAA
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| Protein sequence | MEKPWLKHYP PGVPAEIDAS QYRSLAHLLE DSFQKNRDHR ALECMGKVLT YGEVDALSRQ
LAAWLQSRGL VPGARVALMM PNVLQYPVAL AAVLRAGYVV VNVNPLYTPR ELEHQLKDSG
AEAIVILENF ATTLQQVLPN TPVKHIVVAS MGDLLGGLKG MLVNFVVRSV KKMVPAWELP
NCIRFNTALE AGARLALKPT AVGPDDIAFL QYTGGTTGVS KGATLLHRNI VANVLQSEAW
MQPGLDKPAH DGSRLAPGDE VVTITALPLY HIFALTVCCL LSMRKGGLAV LIPNPRDIPG
FIKVLKRYRF HMFPAVNTLY NALLNHPEFA SVDCSRLRVA NGGGMAVQEA VAKKWLEVTG
CPIIEGYGLS ETSPSATCNP TDTDVFSGTI GVPLPSTEIA IRDDEGRDQP IGTPGEICLR
GPQVMAGYWK RPDETAKVMY ADGFFKTGDV GVMDARGYTK IVDRKKDMIL VSGFNVYPNE
IEGVVAMCPG VLEVAAVGVP DVHSGEVVKL FVVRRDPSLT EERLLAFCKE QLTGYKRPKF
IEFRNELPKT NVGKILRREL RDEAMKKRA
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