Gene RSc2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2833 
SymbolargJ 
ID1221681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3045502 
End bp3046731 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID637239235 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionNP_520954 
Protein GI17547552 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.117876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.478475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGA ATCTCGTCGC GCCCGCCGCT GACTCCCTGT TGCCGATCGA TGGCGTCGAC 
CTCGGCTGGG CCGAAGCCGG CATCCGCAAG GCCAATCGCA AGGACGTGCT GCTGGTGCGC
ATCGCCGAGG GGGCGAGCGT GGCGGGCGTG TTCACGCAGA ACCGATTCTG CGCGGCACCG
GTGCAGGTCT GCCGCGAGCA CCTGGCCAGC GGGCAGGGCG CGCGCGCGAT TGTCGTGAAC
ACCGGCAATG CGAACGCCGG CACCGGTGCG CCGGGCCTGG CGCTCGCGCG CCAGACCTGC
GAGGCGGTGG CCGGGCTGCT CGGGATTGCG CCGCAGCAGG TGCTGCCGTT CTCGACCGGC
GTGATTCTCG AGCCGCTGCC GGTGGATCGC CTCATCGCCG GGCTGCCCGC GGCGCAGGCC
AATGCCAAGC CCGACAACTG GCTGGCGGCC GCCGAGTCCA TCATGACCAC CGACACCGTG
CCCAAGGCGG CATCGGGCAC CTGCACGCTG TCGGGCAAGC CGGTGCGCCT GTCGGGCATC
AGCAAGGGCG CGGGCATGAT CCGCCCGAAC ATGGCGACCA TGCTCGGCTT CATCGCCACC
GATGCCAACG TGGATGAAGC CGTGCTGCAG GGCCTGGTGC GCCATGCCGC CGACCATTCC
TTCAACAGCG TGACGGTCGA CGGCGATACG TCGACCAACG ATTCCTTCGT CGTCATCGCC
ACGGGCCGTG CCGGTACGCC GCGCATCGAT TCCGAATCGC ACCCCGACTA CGCCGCGCTG
CGCGATGCGC TCACGGGCCT GGCGCAGGCG CTGGCACAGA AGATCGTGCG CGACGGCGAA
GGCGCGACCA AGTTTATGAC CATCCGCGTC GAAGGCGGCC GCAGCGTGGA CGAATGCCGC
CAGGTCGCTT ATGCGGTCGC GCATTCGCCG CTGGTCAAGA CCGCGTTCTA TGCGTCGGAT
CCCAACCTGG GCCGCATCCT GGCCGCGGTC GGCTATGCGG GCGTGAACGA TCTCGACGTG
GACGGCGTCA ACCTGTGGCT CGACGATGTC TGGGTCGCCC GCGACGGCGG CCGCAATCCG
GACTATCGCG AAGAAGACGG CCAGCGCGTG ATGAAGCAGG CCGAGATCAC CGTCCGCATC
GCGCTCGGCC GCGGCGACGC GACCGCCACG GTGTGGACGT GCGACTTCTC GCACGACTAC
GTCTCGATCA ACGCGGATTA CCGCTCGTAA
 
Protein sequence
MAVNLVAPAA DSLLPIDGVD LGWAEAGIRK ANRKDVLLVR IAEGASVAGV FTQNRFCAAP 
VQVCREHLAS GQGARAIVVN TGNANAGTGA PGLALARQTC EAVAGLLGIA PQQVLPFSTG
VILEPLPVDR LIAGLPAAQA NAKPDNWLAA AESIMTTDTV PKAASGTCTL SGKPVRLSGI
SKGAGMIRPN MATMLGFIAT DANVDEAVLQ GLVRHAADHS FNSVTVDGDT STNDSFVVIA
TGRAGTPRID SESHPDYAAL RDALTGLAQA LAQKIVRDGE GATKFMTIRV EGGRSVDECR
QVAYAVAHSP LVKTAFYASD PNLGRILAAV GYAGVNDLDV DGVNLWLDDV WVARDGGRNP
DYREEDGQRV MKQAEITVRI ALGRGDATAT VWTCDFSHDY VSINADYRS