Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2790 |
Symbol | tpx |
ID | 1221637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3001027 |
End bp | 3001527 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239191 |
Product | thiol peroxidase |
Protein accession | NP_520911 |
Protein GI | 17547509 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2077] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.071312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.970816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACG TGACCCTTGG CGGCAATCCG ATCGAAGTTG GCGGCGCCCT GCCGTCCGTT GGCGCGAAGG CCCCGGCGTT CACCCTGGTC GGCAAGGACC TGAAGGATGT GTCGCTGGCC GACTTTGCCG GCAAGCGCAA GGTGCTGAAC ATCGTGCCGA GCCTGGACAC GCCGGTGTGC GCCACCTCCA CGCGCAAGTT CAACGAAGCC GTCTCCAAGC TGGAGAACAC CGTGGTGTTC TCCATCTCCG CCGACCTGCC GTTCGCGGCC GGCCGCTTCT GCACGACCGA GGGCCTGGAC AACGTGGTGC CGCTGTCGAC CTTCCGTGAT GCCGGCTTCA AGCAGGCCTA CGGCGTCGAC ATCAAGACCG GTCCGCTGGC CGGCCTGACC GCGCGCGCGG TGGTGGTGCT CGATGCCAAC GACAACGTGC TGCACGCCCA GCTCGTGCCT GAAATCAAGG AAGAGCCGAA CTACGACGCT GCCCTGGCGG CGCTGAAGTA A
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Protein sequence | MANVTLGGNP IEVGGALPSV GAKAPAFTLV GKDLKDVSLA DFAGKRKVLN IVPSLDTPVC ATSTRKFNEA VSKLENTVVF SISADLPFAA GRFCTTEGLD NVVPLSTFRD AGFKQAYGVD IKTGPLAGLT ARAVVVLDAN DNVLHAQLVP EIKEEPNYDA ALAALK
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