Gene RSc2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2790 
Symboltpx 
ID1221637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3001027 
End bp3001527 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID637239191 
Productthiol peroxidase 
Protein accessionNP_520911 
Protein GI17547509 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2077] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.071312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.970816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG TGACCCTTGG CGGCAATCCG ATCGAAGTTG GCGGCGCCCT GCCGTCCGTT 
GGCGCGAAGG CCCCGGCGTT CACCCTGGTC GGCAAGGACC TGAAGGATGT GTCGCTGGCC
GACTTTGCCG GCAAGCGCAA GGTGCTGAAC ATCGTGCCGA GCCTGGACAC GCCGGTGTGC
GCCACCTCCA CGCGCAAGTT CAACGAAGCC GTCTCCAAGC TGGAGAACAC CGTGGTGTTC
TCCATCTCCG CCGACCTGCC GTTCGCGGCC GGCCGCTTCT GCACGACCGA GGGCCTGGAC
AACGTGGTGC CGCTGTCGAC CTTCCGTGAT GCCGGCTTCA AGCAGGCCTA CGGCGTCGAC
ATCAAGACCG GTCCGCTGGC CGGCCTGACC GCGCGCGCGG TGGTGGTGCT CGATGCCAAC
GACAACGTGC TGCACGCCCA GCTCGTGCCT GAAATCAAGG AAGAGCCGAA CTACGACGCT
GCCCTGGCGG CGCTGAAGTA A
 
Protein sequence
MANVTLGGNP IEVGGALPSV GAKAPAFTLV GKDLKDVSLA DFAGKRKVLN IVPSLDTPVC 
ATSTRKFNEA VSKLENTVVF SISADLPFAA GRFCTTEGLD NVVPLSTFRD AGFKQAYGVD
IKTGPLAGLT ARAVVVLDAN DNVLHAQLVP EIKEEPNYDA ALAALK