| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2782 |
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| Symbol | mpl |
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| ID | 1221629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2993040 |
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| End bp | 2994425 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239183 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso- diaminopimelate ligase transmembrane protein |
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| Protein accession | NP_520903 |
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| Protein GI | 17547501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.350308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCC ACATCCTTGG AATCTGCGGC ACCTTCATGG GCGGGATCGC CCTCATCGCC
CGCCAGGCCG GGCACCGCGT CACCGGCTGC GACGCCAACG TCTACCCGCC GATGAGCACC
CAGCTCGAAG CCCAGGGGAT CGAGCTGATC GAGGGCTTCG ATCCGGCGCA GTTGTCGGTC
GGTGCCGATC TGTATGTGAT TGGCAATGTG ATCTCGCGGG GCAACCCGCT GATGGAAGCC
ATCCTCGACC GCAACCTGCC CTATGTCTCG GGGCCGCAGT GGCTGGGCGA CAATGTGCTG
CGGCAGAAGT GGGTGCTCGC TGTAGCCGGC ACACACGGCA AGACGACCAC CACGTCGATG
CTCGCCTGGA TTCTGCAGGA CGCCGGCTAT GACCCGGGCT TCCTGGTGGG CGGCGTGCCG
CGCAACTTCG GGTTGTCGGC GCGGCTGACG GCGTCCGATT TCTTCGTCAT CGAGGCCGAC
GAATACGACA CGGCCTTCTT CGACAAGCGC AGCAAGTTCG TCCATTACCG TCCCCGTACG
GCCATTCTGA ACAATCTCGA GTTCGATCAC GCGGACATCT TTCCCGATCT TGCCGCTATC
GAGACGCAAT TCCACCATCT CGTGCGCACC GTTCCCGGTC AGGGCCGCCT GCTGGTCAAC
GGCCGGGAAG ACAGCCTGAA GCGTGTACTT GCACGCGGAT GCTGGTCGGA AGCCGAGTTT
TTCGGTGCGG AAGACAGCGC AGGCTGGGCC ATTGCCAATC TTGGCGATGA CGACAGCTTC
GACGTCATGC TCGACGGGCA GGTTCAAGGC CGGGTGCGCT GGCCGCTGCA GGGCGACCAC
AACCGCATGA ATGCGCTGGC CGCCATCGCC GCGGCGCGCC ATGTCGGCGT GCCGCCCGCC
CAGGCCATTG AAAGCCTGGC CCGTTTCGAG AATGTGAAAC GGCGCATGGA GGTGCGCGGC
ACCGTGGACG GCATCACCGT CTACGACGAT TTTGCCCACC ACCCGACCGC CATCCGCACC
ACCATCGACG GCCTGCGCCG TCGGGTGGGC GCCGCGCGCA TCCTGGCCGT GCTGGAGCCA
CGTTCCAACA CCATGAAGCT GGGCGTGATG AAGCAGCAGC TTCCCGCCAG CCTGGAGGGC
GCGGACCAGG TGTTTGCCTA CGGCGCCGCC GGCGGCCGCG ACGCGATCGG GTGGGATCTT
GCCGGCGCCC TGGCGCCGCT GGGCGAGCGG GCCCAGGCGT TCTCCGACCT CGTTGCGCTG
GTCGAGGCCG TGACGGCGGC CGCCCGACCC GGCGACCACG TGCTGGTGAT GAGCAACGGC
GGTTTCGGCG GCGTCCACCA GAAATTGCTG GATGCCCTGG GTGAGCGGGT CGGTGCGGCA
AACTGA
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| Protein sequence | MHIHILGICG TFMGGIALIA RQAGHRVTGC DANVYPPMST QLEAQGIELI EGFDPAQLSV
GADLYVIGNV ISRGNPLMEA ILDRNLPYVS GPQWLGDNVL RQKWVLAVAG THGKTTTTSM
LAWILQDAGY DPGFLVGGVP RNFGLSARLT ASDFFVIEAD EYDTAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGQGRLLVN GREDSLKRVL ARGCWSEAEF
FGAEDSAGWA IANLGDDDSF DVMLDGQVQG RVRWPLQGDH NRMNALAAIA AARHVGVPPA
QAIESLARFE NVKRRMEVRG TVDGITVYDD FAHHPTAIRT TIDGLRRRVG AARILAVLEP
RSNTMKLGVM KQQLPASLEG ADQVFAYGAA GGRDAIGWDL AGALAPLGER AQAFSDLVAL
VEAVTAAARP GDHVLVMSNG GFGGVHQKLL DALGERVGAA N
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