Gene RSc2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2714 
SymbolyajC 
ID1221561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2920147 
End bp2920476 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID637239115 
Productpreprotein translocase subunit YajC 
Protein accessionNP_520835 
Protein GI17547433 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.191333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG ACGCTTACGC ACAGACCGCC GGCGCCGCGC CGGGGGGTGC CGGAAATGGC 
CTGATGAGCT TCCTGCCCAT CATCCTGATG TTCGTGGTGC TGTGGTTCAT CATGATCCGC
CCGCAGATGA AGCGGCAGAA GGAAACCAAG ACGATGCTCG AGGCGCTGGC CAAGGGCGAC
GAAGTGGTGA CCGCCGGCGG CATCCTGGGC AAGGTGACCA AGGTGACCGA CCAGTACATC
ACGGTCGAAG TCGCCCCGAA TACCGAACTC ACCGTGCAGA AGAATGCTGT GACGACCGTG
CTGCCCAAAG GCACGCTCAA GTCGCTGTAA
 
Protein sequence
MISDAYAQTA GAAPGGAGNG LMSFLPIILM FVVLWFIMIR PQMKRQKETK TMLEALAKGD 
EVVTAGGILG KVTKVTDQYI TVEVAPNTEL TVQKNAVTTV LPKGTLKSL