| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2651 |
|---|
| Symbol | recN |
|---|
| ID | 1221498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2852708 |
|---|
| End bp | 2854417 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637239052 |
|---|
| Product | DNA repair protein |
|---|
| Protein accession | NP_520772 |
|---|
| Protein GI | 17547370 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.829393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACA GCCTGACCAT CCGCGATTTC GTCATCGTCC ATGCCCTGGA CCTCGACCTG
GCCGACGGCT TCACCGTGTT CACGGGCGAG ACCGGCGCCG GCAAGTCCAT CCTGATCGAC
GCGCTGGCGC TGACGCTCGG CGAGCGCGCC GATGCCACCG TGGTGCGCGA GGGCGCGCCG
CGCGCCGACA TCACCGCCGC GTTCGACACC CACCCGCAGG TGCTCGCCTG GCTGGAAGCG
CACGAGCTGC ACGGCGACGA CGGCACCATC CTGCTGCGCC GCACGGTCGA TGCCGCCGGC
CGCAGCAAGG CCTTCATCAA CGGCGCGGCC GTCACGCTGG CGCAGTTGCG CGAGGTCGGC
GAACAGCTGG TCGACATCCA CGGCCAGCAT GCGCACCAGC TGCTGCTCAA GACCGATGCC
CAGCGCCGCC TGCTCGATGC CCATGCGGGG CTGGAAGACG AGGTGCGCGC GGTCGGCGAG
CGGTATCGCG CATGGCAGGC GGTGGTCCGC CTGCGCGAGG CGGCCGAGCA GCAGTCGCGC
GAAGCGCAGC TCGAGCGCGA GCGCGTGGAA TGGCAGGTCA GCGAATTGCA GAAGCTCGCC
CCGCAGCCGG GCGAGTGGGA AGAAGTCCAG GCCGAGCATC ACCGCCTGTC GCACGCGGCC
AGCCTGATCG AGGGCACGCG CGCGGCGCTG GATACGCTGT CCGAAGCGGA CAGCGCCGTG
CTCACGCAGC TCGGTGCGGC GGTGCACGGC CTGCAGGCCC TGGCCGAGAT CGACCCGGCA
CTGGCCGACG TGCTGGCCGC GCTGGAGCCC GCGCAGGTGC AAGTCCAGGA AGCCGTGCAT
TCGCTCGCCC GCTACGCCGA CCGCGCCGAA CTGGATCCGG ACCGGCTGGC CGAGGTCGAC
GCACGCCTGC AGGCGCTGCA CACCATGGCG CGCAAATACC GCGTCGCCCC CGAGACCCTG
CCTGCCGAGC TGACGCAGCG GCAGGCGCAG CTGGCCGCAT TGCAGGCCGC CTCCGACCTG
GACGCGCTGC AGGCGCAAGA GGCGCAAACC CATGCGGCCT ATCTGCAAGC CGCGCAGGCG
CTGTCGCGCG GGCGAGCCAA AGCCGCGCGC GAACTGGCCG ACGCCGTGAC CGGCGCCATG
CAGGGGCTGT CGATGGCGGG CGGGCGGTTC GAGATCGCGC TGCATCCGCT GGAACCGGGC
GGCGCGGCCG GGCTGGAGCA GGTGGAGTTC CTGGTCGCCG GACATGCGGG CGTGTCGCCG
CGTCCGCTGG CCAAGGTGGC CTCGGGCGGC GAACTCGCCC GGATCAGCCT AGCGATCTCG
GTGATCGCCA GCGAGGCCAG CCCGACCCCG ACGCTGATCT TCGACGAGGT CGACTCCGGC
ATCGGCGGCG CCGTGGCCGA GGTGGTCGGC CGGCGGCTGC GCGAACTGGG CACACGCCGC
CAGGTGCTGT GCGTGACCCA CCTGCCGCAG GTGGCGGCGC TGGCCAACCA CCACGTGCAG
GTCGCCAAGC AGACCGTGGA CGGCAGCACG CGCTCCGACC TGGTGGTGCT CGATGCCACC
GGCCGCGTCG ACGAGATCGC CCGCATGCTG GGCGGCGCAT CGCTGACCGA CACCACGCGC
CGCCACGCCG ACGAAATGCT CGCCGCGGGC CGGGCGCATC CGGCGCCCGC GCCGGCCGGG
CAGCGGAAAT CCCGGCGCGC GGTCCAGTGA
|
|---|
| Protein sequence | MLHSLTIRDF VIVHALDLDL ADGFTVFTGE TGAGKSILID ALALTLGERA DATVVREGAP
RADITAAFDT HPQVLAWLEA HELHGDDGTI LLRRTVDAAG RSKAFINGAA VTLAQLREVG
EQLVDIHGQH AHQLLLKTDA QRRLLDAHAG LEDEVRAVGE RYRAWQAVVR LREAAEQQSR
EAQLERERVE WQVSELQKLA PQPGEWEEVQ AEHHRLSHAA SLIEGTRAAL DTLSEADSAV
LTQLGAAVHG LQALAEIDPA LADVLAALEP AQVQVQEAVH SLARYADRAE LDPDRLAEVD
ARLQALHTMA RKYRVAPETL PAELTQRQAQ LAALQAASDL DALQAQEAQT HAAYLQAAQA
LSRGRAKAAR ELADAVTGAM QGLSMAGGRF EIALHPLEPG GAAGLEQVEF LVAGHAGVSP
RPLAKVASGG ELARISLAIS VIASEASPTP TLIFDEVDSG IGGAVAEVVG RRLRELGTRR
QVLCVTHLPQ VAALANHHVQ VAKQTVDGST RSDLVVLDAT GRVDEIARML GGASLTDTTR
RHADEMLAAG RAHPAPAPAG QRKSRRAVQ
|
|---|
| |