| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2634 |
|---|
| Symbol | dnaJ |
|---|
| ID | 1221481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2836729 |
|---|
| End bp | 2837871 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637239035 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | NP_520755 |
|---|
| Protein GI | 17547353 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00367611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.591004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC GTGATTACTA CGAAGTGCTC GGGGTGGGCA AGAACGCGAG CGACGACGAG
ATCAAGAAGG CGTATCGCAA GCTTGCGATG AAGTACCACC CGGACCGCAA TCCGGACAGC
AAGGAAGCGG AAGAGAAATT CAAGGAGGCC AAGGAAGCCT ACGAGATGCT CTCCGACGCG
GACAAGAAGG CGGCCTACGA CCAGTACGGC CATGCCGGCG TCGACCCCAA CATGGCCGGC
GGCTTCGGCG CGGGGGCGCA AGGCTTCGGC GGCTTCGCGG AAGCCTTCGG CGACATCTTC
GGCGATATCT TCGGGCAGGC CCAGCAGGGC GGCCGCCGCG GCGCGGGCCC GCAGATGTAT
CGCGGCGCCG ACCTGCGCTA CAGCATGGAG ATCACGCTGG AGCAGGCCGC GCACGGCTAC
GACACGCAGA TCCGCGTGCC GCACTGGGAC GAATGCGACC ACTGCCACGG CAAGGGCGCC
GAGCCCGGCT CCAGCGTGGA GACCTGCCCG ACCTGCCACG GCGCCGGCCA GGTGCGCGTG
TCGCAGGGCT TCTTCACGAT GCAGCAGACC TGCCCGAAGT GCCACGGCAA CGGCAAGTAC
ATCCCCAAGC CTTGCAGCAA GTGCCATGGC CAGGGCAAGG TGAAGAGCCA GAAGACGCTG
GAAGTGAAGA TTCCGGCGGG CATCGACGAG GGCATGCGCA TCCGCTCCTC GGGCAACGGC
GAGCCGGGCA TCAACGGCGG CCCGCCGGGC GACCTGTATG TGGAAATCCA CATCAAGGCG
CACTCCGTGT TCGAGCGCGA CGGCGACGAC CTGCACTGCC AGATGCCGAT CTCCTTCGCT
GTCGCGGCCA TGGGCGGCGA TATCGAGGTG CCGACGCTGG GCGGCCGCGT GACCTTCAAC
GTGCCCGAGG GCACGCAGGC CGGCAAGACC TTCCGTCTGC GCGGCAAGGG CATCAAGGGC
GTGCGCTCGG GCTATGCCGG CGATCTGTAC GTGCATGTGG TGATCGAAAC GCCGGTGCGG
CTGACCGAGC ACCAGAGGGA GCTGCTGCGC CAGTTCGACA AGTCCGTCCA TGAAGGCGGC
TCGCGGCACA GTCCGCAGGA GCAGTCGTGG CTGGACAAGG TGAAGAACTT CTTCTCCAGC
TGA
|
|---|
| Protein sequence | MAKRDYYEVL GVGKNASDDE IKKAYRKLAM KYHPDRNPDS KEAEEKFKEA KEAYEMLSDA
DKKAAYDQYG HAGVDPNMAG GFGAGAQGFG GFAEAFGDIF GDIFGQAQQG GRRGAGPQMY
RGADLRYSME ITLEQAAHGY DTQIRVPHWD ECDHCHGKGA EPGSSVETCP TCHGAGQVRV
SQGFFTMQQT CPKCHGNGKY IPKPCSKCHG QGKVKSQKTL EVKIPAGIDE GMRIRSSGNG
EPGINGGPPG DLYVEIHIKA HSVFERDGDD LHCQMPISFA VAAMGGDIEV PTLGGRVTFN
VPEGTQAGKT FRLRGKGIKG VRSGYAGDLY VHVVIETPVR LTEHQRELLR QFDKSVHEGG
SRHSPQEQSW LDKVKNFFSS
|
|---|
| |