| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2586 |
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| Symbol | traG |
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| ID | 1221433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2792029 |
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| End bp | 2794056 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238987 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | NP_520707 |
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| Protein GI | 17547305 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTC AGGGCGTGCT GTTCGGGCAG ATCGCCGCCG TCTTCGGCAT CGTGATCGCC
GGTGTGTGGA GTGCAACGCA ATGGACAGCC GCCGCCCTGG GCTACCAACT ACGCCTTGGC
TCGCCGTGGT TCGATTTCTT CGGCACGCCG GTCTATCACC CCTGGCGGCT GTTCGAGTGG
TGGTTCTTCT TCGATGCCTA CGCGCCGCAC GTCTTCGACA TAGGTGGCGC GATTGCAGGC
GGCAGCGGCC TGGTGGCCGT GGCCGTGACC ATCGCCATGT CGGTGTGGCG CTCGCGGCAA
TCGCGCATGG TCACGACCTA CGGTTCGGCG CGCTGGGCCG AAGCGGATGA CATCCGCAAA
GCCGGGCTGA CGCAGCCGGC CGGCGTCTTC CTAGGCAAGT ATCGCAACGA GTATCTGCGC
CATGAAGGCC CGGAACACGT CCTGACTTTC GCGCCCACTC GCTCGGGCAA GGGTGTCGGC
TTGGTCGTCC CGACATTGCT GTCCTGGCCG GCTTCGGCCG TCATCCATGA CATCAAAGGC
GAGAACTGGC AGATCACCGC AGGTTGGCGC AGCCGGTTCA GCCACTGCCT GCTGTTCAAC
CCGACCGATG CGAGGTCAGC GGCCTACAAC CCGCTCCTGG AGGTACGGCG CGGCGCGCAT
GAGGTGCGCG ATGTGCAGAA CATCGCGGAC ATTCTCGTTG ACCCCGAGGG CGCGCTGGAG
AAGCGCAACC ATTGGGAGAA GACTTCGCAC GCGCTGCTGG TCGGCGCGAT CCTGCATGTA
CTCTATGCCG GCGAGGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTGTC CGACCCGGCC
AGCCCGTTCG AGCTGACCTT GCATCGGATG ATGACGACGA AGCACCTGGG CGATGCACCG
CACCCGGTTG TCGCGTCCGC CGCCCGCGAA GTGCTCAACA AATCGGACAA CGAACGCTCG
GGCGTGTTGA GCACCGCCAT GTCGTTCCTC GGCCTGTACC GCGACCCGAC CGTGGCGGAA
GTGACTTCGC GCTGCGACTG GCGCATCGCC GACCTGATCG CATCCGAGCA TCCGGTGTCC
CTCTATTTGG TGGTGCCGCC ATCGGACATT TCGCGGACGA AGCCGCTCAT CCGCCTGATC
CTCAACCAGA TCGGCCGGCG GCTCACCGAA TCTCTCGACG GCAGCGATGG CATCGCGCGC
CGCCACAAGC TGCTGCTGAT GCTGGACGAG TTCCCGGCGC TGGGCCGGCT CGACTTCTTC
GAGACGGCGC TGGCCTTCAT GGCCGGCTAC GGCATCCGCA GCTTCCTCAT CGCGCAGTCG
CTCAACCAGA TCGACAAAGC CTACGGCCAG AACCACTCCA TCCTCGACAA CTGCCACGTC
CGCGTGACGT TTTCGACGAA CGACGAACGC ACGGCCAAAC GGGTTTCGGA AACGCTGGGC
ACCGCCACCG AACTGCGCGC CCAGCGCAAC TATGCCGGGC ACAGATTGGC CCCCTGGCTG
GGGCACCTCA TGGTGTCGCG CCAGGAGACG GCCCGTCCGC TGCTGACGCC CGGCGAAGTC
ATGCAGCTTC CGACCGACGA AGCCGTGGTG ATGGTGTCCA GCGTGGCACC GATCAAGGCC
AAGAAGCTGC GCTACTACGC CGACGCCAAC TTCAAGAGCC GCGTATTGCC GCCGCCCGCG
CTCGCGGCCG GGCCAATCAA TGGACGTTAT GCCGACGCGC CACCGGCCCG GCCCGACGAC
TGGAGCGGCC TGGCGATCCC CGCTGTACCA GCGGCCCCGG CTGCGAGCCA GTCCAGCGAT
GGCGCAGGCA CCGCCGATGA CGGCGGCCCG CGCCGCCAGC CCGAGCTATC CGAAGTCGCC
GAATACAGCC CCGAGCCGCA GCCCGCATGC AACGACCTGG CGCTGCTCGA TGACGACGAC
GACCTGCCGC TGCCTTACGC GGCCTCTCTC CCCGGCCAGC TCGACCCGGC CATGCAGCGC
ACGGCCCGGC TGGCTTCCCT CGACCCTAAC GACGGAATCG ACCTATGA
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| Protein sequence | MQAQGVLFGQ IAAVFGIVIA GVWSATQWTA AALGYQLRLG SPWFDFFGTP VYHPWRLFEW
WFFFDAYAPH VFDIGGAIAG GSGLVAVAVT IAMSVWRSRQ SRMVTTYGSA RWAEADDIRK
AGLTQPAGVF LGKYRNEYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDARSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTKHLGDAP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIASEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIAR RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFSTNDER TAKRVSETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPTDEAVV MVSSVAPIKA
KKLRYYADAN FKSRVLPPPA LAAGPINGRY ADAPPARPDD WSGLAIPAVP AAPAASQSSD
GAGTADDGGP RRQPELSEVA EYSPEPQPAC NDLALLDDDD DLPLPYAASL PGQLDPAMQR
TARLASLDPN DGIDL
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