| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2562 |
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| Symbol | |
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| ID | 1221409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2770326 |
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| End bp | 2772002 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238963 |
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| Product | hypothetical protein |
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| Protein accession | NP_520683 |
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| Protein GI | 17547281 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0758211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC CATCCCGCCC CGACGCTCCG GGCGATGGCC GGCCCCGCCG GCTGCCGGGC
GTCGCGCGCT GCCGGCGCGA CGCCGCCGGA CATCCTCCGG CGCATCGGCT CCGCTGGCTG
CAGTTGCTCA TCTGGCTGGT GCCGATGCTG GCGGCGCTGG TCAGCATCGG CCTCGTCGCC
GGGCAAGTGC GCGGGCACGG GCCGGCCATC ACCCTCGGTT TCCAGGACGG CGAAGGCATC
GAGCCCGGCA AGACGCCGGT CAGGTACAAC GACGTCGACA TCGGCATGGT GACGGCGGTC
AGGCTGTCGA CGGACCTGTC CCGCGTCCTT GTCACGGTGC AGCTGAACCA GGAGGCCGCC
GACTTCGCCA CCCACGGCAC GCGCTTCTGG ATCGTGCGCC CGCGTGCCGG CATGAGCGGT
GCCTCCGGCC TCGGCACGCT GCTGTCCGGC ACCTATATCG GCGCCGACAG CGGCGGCTCG
CACGAACCCG AAACGCAGTT CACCGGCCTG GAAAACCCGC CCGTGGTGAG CTTGCGCCAG
CAGGGCGCGC GTTTCGTCCT GCGCGGGCCA TCGCTCGGCT CGGTGGAAAC GGGATCGCCC
GTCTACTACC GCCATGTCGA GGTCGGGCAG GTGACCGGCA CCGCGCTGGA CAAGGATGGC
GCGGGCGTGA CGATCGACGT GTTCATCGAG GCGCCCTACC ATCGGTACGT CGGCCGGGAC
ACGCAGTGGC GGCATGCAAG CGGCCTCGGG TTGAGGCTCG ATGCGGCCGG CCTTCGCGTG
AACGCCGAAT CCTTCCAGAC GATGCTGCTG GGCGGCATCG CCTTCCAGCC GTCGCCCGGC
CAGCCCGCGG GCGACGCCGT GCCGGACGGC ACGGTCTTCG GCCTCCAGTC CGGCGACCTC
GATGCGGCAG ATGGCCCCGA CGGCAAGCCG TCCACCGTGG TCATGCATTT CGACCAGTCG
CTGCACGGGC TGTCGGTCGG CGCGGCGGTG GATTTCCGCG GCGTGCAGTT GGGCGAAGTG
ACGAACGTCG GGGTGGCGTT CGATCCGAAG ACACACACCT TCGTCATGCC GGTCACGCTG
AACCTGTACC CCGACCGCCT CGGGCAGGCC TTCCGCGCCT CCTCCGAGTA CGGCGACGCC
GCCGCGGGCA AGGCGCTGCT GCGCACGCTC GTGGCGCGGG GACTGCGCGG ACAACTGCGC
ACCGGCAACC TGCTCACCAA TCAGCTGTAC GTGGCGCTCG ACATGTTCCC GAACGCGCCG
CCGGTGCAGC TCGACCTGAA CGGAACGCTG ATCGCGCTGC CGACCATCCC GAACACGCTC
GACGACCTCC AGGCCCAGGT CGCAGACCTC GCCAAGACGC TCGATCGGGT TCCGCTGGAC
CAGCTGGGCA CCCACCTCGG CCAGCGCCTG GACAACGCCC GTCGCCTCTT CGCGCTGACC
GATGCGCAAC TGGCGCCGCA GGCGCGCGCG ACGCTTGCCG CCGCGCGGCA GGCATTCGAT
GCGGCACAGG CGATCGCGCA GAGTCCGTTG CTGCGGCCGG CAGACCTGTC GCGGGTGCGG
GAGCAGTTGG GGCAGACGTT GCGCGCCCTC GACACGCTCA CCGATACGGT CGCGCAGCAT
CCGGAATCGC TGGTGTGGGG CCCGGCCGTC GACACGCGGA CCGCGCAGTC GCCATGA
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| Protein sequence | MTKPSRPDAP GDGRPRRLPG VARCRRDAAG HPPAHRLRWL QLLIWLVPML AALVSIGLVA
GQVRGHGPAI TLGFQDGEGI EPGKTPVRYN DVDIGMVTAV RLSTDLSRVL VTVQLNQEAA
DFATHGTRFW IVRPRAGMSG ASGLGTLLSG TYIGADSGGS HEPETQFTGL ENPPVVSLRQ
QGARFVLRGP SLGSVETGSP VYYRHVEVGQ VTGTALDKDG AGVTIDVFIE APYHRYVGRD
TQWRHASGLG LRLDAAGLRV NAESFQTMLL GGIAFQPSPG QPAGDAVPDG TVFGLQSGDL
DAADGPDGKP STVVMHFDQS LHGLSVGAAV DFRGVQLGEV TNVGVAFDPK THTFVMPVTL
NLYPDRLGQA FRASSEYGDA AAGKALLRTL VARGLRGQLR TGNLLTNQLY VALDMFPNAP
PVQLDLNGTL IALPTIPNTL DDLQAQVADL AKTLDRVPLD QLGTHLGQRL DNARRLFALT
DAQLAPQARA TLAAARQAFD AAQAIAQSPL LRPADLSRVR EQLGQTLRAL DTLTDTVAQH
PESLVWGPAV DTRTAQSP
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