Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2559 |
Symbol | dedA |
ID | 1221406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2767764 |
End bp | 2768420 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238960 |
Product | DEDA DSG-1 protein transmembrane |
Protein accession | NP_520680 |
Protein GI | 17547278 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0105855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATATCG TGATGCAACT GATCGACATC GTGCTGCATG TCGACAAATC GCTGGGGATG CTGATCCAGC AATACGGCGC GTGGGTCTAC GTGCTGCTGT TCGCCATCGT GTTTGCCGAA ACCGGCCTGG TGGTGCTGCC GTTCCTGCCG GGCGACACGC TATTGTTCAT TGCCGGCGCC ATGTGCGCAA CCGGCCAGAT GGATGCCTGG CTGCTGATCG CCCTGCTGGT GACGGCCGCG GTCACGGGCA ATACGGTCAA CTATTTCGTC GGCACCTGGA TCGGGCCGAA GGTGTTCGAC GGGCATATCC GCTTTCTCGA CCACGAGGCG TTGCTCAAGA CGCACGCCTT CTACGAGCGC CACGGCGGCA AGACACTGGT GATGGCGCGC TTCATTCCGG TGGTGCGCAC GTTCGCGCCG TTCGTGGCCG GCGTGTCGAA GATGACCTTC GCCAAGTTCC AGCTGTTCAA CATGATCGGG GCGGTGCTGT GGGTGGCGAT CCTGGTGCTG TCCGGCGAAG CCTTCGGCAC CGTGCCGGTG ATTCGCGACC ACCTGAACAC CATCGTGCTG ATCGGCCTGG GCGCGGCCGT CGTGCCGCTG GTGCTGGGCG GGCTGTGGAA GCTGCTCAAG CGCCGCCGCA CGGTGGTGCA GAAATAA
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Protein sequence | MDIVMQLIDI VLHVDKSLGM LIQQYGAWVY VLLFAIVFAE TGLVVLPFLP GDTLLFIAGA MCATGQMDAW LLIALLVTAA VTGNTVNYFV GTWIGPKVFD GHIRFLDHEA LLKTHAFYER HGGKTLVMAR FIPVVRTFAP FVAGVSKMTF AKFQLFNMIG AVLWVAILVL SGEAFGTVPV IRDHLNTIVL IGLGAAVVPL VLGGLWKLLK RRRTVVQK
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