| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2554 |
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| Symbol | argF |
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| ID | 1221401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2763052 |
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| End bp | 2763978 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238955 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | NP_520675 |
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| Protein GI | 17547273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0520201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCAC CAAGCAAGAT CAAGCATTAC CTGCAGTTCA AGGACTTTTC CCTGGAAGAG
TACGCGTACC TGCTGGACCG CTCCAGGATC CTCAAGGCCA AGTTCAAGAA CTACGAGACG
TGGCACCCGC TGCATGACCG CACGCTGGCC ATGATCTTCG AGAAGAATTC CACGCGCACG
CGTCTGTCGT TCGAAGCCGG CATCCACCAG CTCGGCGGCC ACGCCGTCTT CCTCAACACG
CGCGACTCGC AACTGGGCCG CGGCGAGCCG ATCGAGGACG CGGCGCAGGT CATCTCCCGC
ATGACCGACA TCATCATGAT CCGCACCTTC GGGCAGGAGA TCATCGAGCG CTTTGCCACC
CACTCGCGCG TGCCGGTCAT CAACGGGCTG ACCAACGAAT ACCATCCGTG CCAGGTGCTG
GCCGACATCT TTACCTTCAT CGAGCACCGT GGCCCGATCC AGGGCAAGAC CGTCACCTGG
GTCGGCGACG CCAACAACAT GGCGTACACC TGGATCCAGG CGGCCGAGAT CCTCGGCTTC
CGCTTCCATT TCTCCGCGCC CAAGGGCTAC CAGCTCGATC CGGTCATGGT GGCCGACTCC
AGCCGCCCGT TCGTGCACGT GTTCGAGAAC CCGCTCGAAG CCTGCGAAGG CGCCCACCTG
GTGACCACCG ACGTGTGGAC CAGCATGGGC TACGAGGCCG AGAACGAAGC GCGCAAGAAG
GCCTTCGGCG ACTGGATGGT CACCGAAGCG ATGATGCAGC GCGCCCAGCC TGACGCGCTG
TTCATGCACT GCCTGCCCGC GCACCGCGGC GAGGAAGTCG AAGCGGCCGT CATCGACGGC
AAGCAGAGCG TCGTGTGGGA CGAGGCGGAA AACCGCCTGC ACGTGCAGAA GGCGCTGATG
GAATACCTGC TCTGCGGCCG GTACTAA
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| Protein sequence | MNPPSKIKHY LQFKDFSLEE YAYLLDRSRI LKAKFKNYET WHPLHDRTLA MIFEKNSTRT
RLSFEAGIHQ LGGHAVFLNT RDSQLGRGEP IEDAAQVISR MTDIIMIRTF GQEIIERFAT
HSRVPVINGL TNEYHPCQVL ADIFTFIEHR GPIQGKTVTW VGDANNMAYT WIQAAEILGF
RFHFSAPKGY QLDPVMVADS SRPFVHVFEN PLEACEGAHL VTTDVWTSMG YEAENEARKK
AFGDWMVTEA MMQRAQPDAL FMHCLPAHRG EEVEAAVIDG KQSVVWDEAE NRLHVQKALM
EYLLCGRY
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