| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2534 |
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| Symbol | |
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| ID | 1221381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2741423 |
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| End bp | 2742181 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238935 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase protein |
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| Protein accession | NP_520655 |
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| Protein GI | 17547253 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.145458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATTC GCGATCAGGT GTTCATCGTC ACCGGCGGCG CGTCGGGCTT GGGCGCGGGA
ACGACGCGCG CGCTGGCGGA GGCCGGCGGC AAGGTGGTGA TCGCAGACCT GAACGAGGCC
GCCGGCGCGG CGCTGGCGCA GGAGATCGGC GGGCGCTTCG TGCGCTGCGA CGTCAGCTCG
GAAGCCGACG GCCAGGCCGC GGTGCAGGCC GCCACCTCGC TCGGCGCGCT GGCGGGGCTG
GTGAACTGCG CGGGCATCGC CCCGGCGTCG CGCACGGTGG GCAAGGCCGG ACCGCACCCG
CTCGACCAGT TCGCGCGCGT CATCAACATC AACCTGATCG GCACGTTCAA CATGATCCGC
CTGGCGGCCA CGGCGATGAC CGCCAACGCC CCCAATGCCG GCGGCGAGCG CGGCGTCATC
ATCAACACCG CGTCGGTGGC GGCGTTCGAC GGGCAGATCG GCCAGGCCGC CTATGCGGCA
TCCAAGGGCG GCGTGGTGGC GATGACGCTG GCGATCGCGC GCGACCTGTC GCGCGACGGC
ATCCGCGTGA TGACGATCGC GCCGGGCATC TTCGAGACGC CGATGCTGCT GGGCATGCCG
CCGGAGGTGC AGGATGCGCT GGGCAAGATG GTGCCGTTCC CGCCGCGGCT GGGGAAACCG
GCGGAGTATG CGCAGCTGGC GCGCGCCATC ATCGAGAACC CGATGCTCAA CGGCGAGACG
ATCCGGCTCG ACGGCGCCAT CCGCATGCAG CCGAAGTAA
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| Protein sequence | MEIRDQVFIV TGGASGLGAG TTRALAEAGG KVVIADLNEA AGAALAQEIG GRFVRCDVSS
EADGQAAVQA ATSLGALAGL VNCAGIAPAS RTVGKAGPHP LDQFARVINI NLIGTFNMIR
LAATAMTANA PNAGGERGVI INTASVAAFD GQIGQAAYAA SKGGVVAMTL AIARDLSRDG
IRVMTIAPGI FETPMLLGMP PEVQDALGKM VPFPPRLGKP AEYAQLARAI IENPMLNGET
IRLDGAIRMQ PK
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