Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2534 |
Symbol | |
ID | 1221381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2741423 |
End bp | 2742181 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637238935 |
Product | 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase protein |
Protein accession | NP_520655 |
Protein GI | 17547253 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.145458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATTC GCGATCAGGT GTTCATCGTC ACCGGCGGCG CGTCGGGCTT GGGCGCGGGA ACGACGCGCG CGCTGGCGGA GGCCGGCGGC AAGGTGGTGA TCGCAGACCT GAACGAGGCC GCCGGCGCGG CGCTGGCGCA GGAGATCGGC GGGCGCTTCG TGCGCTGCGA CGTCAGCTCG GAAGCCGACG GCCAGGCCGC GGTGCAGGCC GCCACCTCGC TCGGCGCGCT GGCGGGGCTG GTGAACTGCG CGGGCATCGC CCCGGCGTCG CGCACGGTGG GCAAGGCCGG ACCGCACCCG CTCGACCAGT TCGCGCGCGT CATCAACATC AACCTGATCG GCACGTTCAA CATGATCCGC CTGGCGGCCA CGGCGATGAC CGCCAACGCC CCCAATGCCG GCGGCGAGCG CGGCGTCATC ATCAACACCG CGTCGGTGGC GGCGTTCGAC GGGCAGATCG GCCAGGCCGC CTATGCGGCA TCCAAGGGCG GCGTGGTGGC GATGACGCTG GCGATCGCGC GCGACCTGTC GCGCGACGGC ATCCGCGTGA TGACGATCGC GCCGGGCATC TTCGAGACGC CGATGCTGCT GGGCATGCCG CCGGAGGTGC AGGATGCGCT GGGCAAGATG GTGCCGTTCC CGCCGCGGCT GGGGAAACCG GCGGAGTATG CGCAGCTGGC GCGCGCCATC ATCGAGAACC CGATGCTCAA CGGCGAGACG ATCCGGCTCG ACGGCGCCAT CCGCATGCAG CCGAAGTAA
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Protein sequence | MEIRDQVFIV TGGASGLGAG TTRALAEAGG KVVIADLNEA AGAALAQEIG GRFVRCDVSS EADGQAAVQA ATSLGALAGL VNCAGIAPAS RTVGKAGPHP LDQFARVINI NLIGTFNMIR LAATAMTANA PNAGGERGVI INTASVAAFD GQIGQAAYAA SKGGVVAMTL AIARDLSRDG IRVMTIAPGI FETPMLLGMP PEVQDALGKM VPFPPRLGKP AEYAQLARAI IENPMLNGET IRLDGAIRMQ PK
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