| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2524 |
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| Symbol | |
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| ID | 1221371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2730414 |
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| End bp | 2731139 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238925 |
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| Product | hypothetical protein |
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| Protein accession | NP_520645 |
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| Protein GI | 17547243 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0445127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00571488 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCAAGC TGCTGATCCT GCTGCTCTCG GGACTGAAGT TCGGCAAGCT GCTGACCACC
GGCGGCACCA TGCTGCTGTC GGTGATGGCG TACGCCTTCG TGTTCGGCTG GCGCTATGCG
GCGGGCTTCG TGGTGCTGCT GTTCATCCAC GAGATGGGCC ACTACGTGGC GGCGCGCCAG
CGCGGGCTGG CCGTGGGCGC GCCCACCTTC ATCCCATTCG TCGGCGCGTG GATCGACCTG
AAGGAACAGC CGATGGACGT CGAGACCGAG GCGTACATCG GCCTGGCCGG CCCGGTCGCG
GGCACGGTGG GCGCCATGCT GTGCTACGGC CTGGCGCGCT GGACCGACAG CCAGCTGCTG
CTTGCGCTGG CGTATGCCGG GTGCTTCCTG AACCTGTTCA ACCTGATCCC GCTGGCGCCG
TTCGACGGCG GGCGCATCAC CGCGGTGTTG TCGCCGCGCA TCTGGTTCCT GGGCGTGCCG
GTGCTGGTGG CGCTGTTCGT CTGGCGCATG AGCCCGATCC TGGTGCTGAT GGCGATCCTG
GCCGTGCCCC AGCTGATGAA GGCATGGCGC TACGATCCCG ACGCGCCGGA AAATCGCGCC
TACTACAGCA TCTCCGCCGA AGCGCGGCTG ACCTTCACGG TGTACTACCT GGGCCTGGTC
GTGTTCCTCG CGATGATGAC CCATGAACTG CACGGCATGC TGGAGACGAT CCGACCGGCC
GGGTGA
|
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| Protein sequence | MAKLLILLLS GLKFGKLLTT GGTMLLSVMA YAFVFGWRYA AGFVVLLFIH EMGHYVAARQ
RGLAVGAPTF IPFVGAWIDL KEQPMDVETE AYIGLAGPVA GTVGAMLCYG LARWTDSQLL
LALAYAGCFL NLFNLIPLAP FDGGRITAVL SPRIWFLGVP VLVALFVWRM SPILVLMAIL
AVPQLMKAWR YDPDAPENRA YYSISAEARL TFTVYYLGLV VFLAMMTHEL HGMLETIRPA
G
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