Gene RSc2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2500 
Symbol 
ID1221347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2706732 
End bp2707142 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content63% 
IMG OID637238901 
Producthypothetical protein 
Protein accessionNP_520621 
Protein GI17547219 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.831259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0755951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAG CCATCGAACG TTGGCGCGAC GAGCTCATCC TGCTCGGTCG CGTGCTGATG 
ATGCTCCTGT TCCTGATTTC CGGCTGGGGC AAACTGACCG GTTTTTCCGC CACCGTCGGC
TACATGGGGA CGGTGGGCGC GCCGATGCCG ATGCTCGCGG CCATCGTCGC GGTGATCATG
GAGTTCGGCG TGGGCATCGC TCTGCTGATC GGCTTCTGGA CCCGCCCGCT GGCGCTGCTG
ATGGCGCTGT TCGTGCTGGG CACCGCGCTG ATCGCCCATA CCTACTGGAA CGTCGAGGGT
GCGATGCAGA CCGCCAACAT GGTGCAGTTC TACAAGAACC TCAGCATCAT GGGCGGCCTG
ATCCTGCTGT CCGTGACGGG CGCGGGCAAG TACGCGTTGC AGAAATCCTA G
 
Protein sequence
MNAAIERWRD ELILLGRVLM MLLFLISGWG KLTGFSATVG YMGTVGAPMP MLAAIVAVIM 
EFGVGIALLI GFWTRPLALL MALFVLGTAL IAHTYWNVEG AMQTANMVQF YKNLSIMGGL
ILLSVTGAGK YALQKS