Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2500 |
Symbol | |
ID | 1221347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2706732 |
End bp | 2707142 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238901 |
Product | hypothetical protein |
Protein accession | NP_520621 |
Protein GI | 17547219 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.831259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0755951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAG CCATCGAACG TTGGCGCGAC GAGCTCATCC TGCTCGGTCG CGTGCTGATG ATGCTCCTGT TCCTGATTTC CGGCTGGGGC AAACTGACCG GTTTTTCCGC CACCGTCGGC TACATGGGGA CGGTGGGCGC GCCGATGCCG ATGCTCGCGG CCATCGTCGC GGTGATCATG GAGTTCGGCG TGGGCATCGC TCTGCTGATC GGCTTCTGGA CCCGCCCGCT GGCGCTGCTG ATGGCGCTGT TCGTGCTGGG CACCGCGCTG ATCGCCCATA CCTACTGGAA CGTCGAGGGT GCGATGCAGA CCGCCAACAT GGTGCAGTTC TACAAGAACC TCAGCATCAT GGGCGGCCTG ATCCTGCTGT CCGTGACGGG CGCGGGCAAG TACGCGTTGC AGAAATCCTA G
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Protein sequence | MNAAIERWRD ELILLGRVLM MLLFLISGWG KLTGFSATVG YMGTVGAPMP MLAAIVAVIM EFGVGIALLI GFWTRPLALL MALFVLGTAL IAHTYWNVEG AMQTANMVQF YKNLSIMGGL ILLSVTGAGK YALQKS
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