| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2416 |
|---|
| Symbol | |
|---|
| ID | 1221262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2621051 |
|---|
| End bp | 2622169 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637238816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_520537 |
|---|
| Protein GI | 17547135 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTCG AACAAGCCCT GCGACGCGAG CTTTCCTTTA CTGCCGGCGC CGTCTTCCTC
GTCCTGCTCA CCTTCATGCT GACCACGCTG GTGATCCGCA TCCTGGGCAT GGCGGCCAAC
GGCGAGGCCA GTCCCAACGA CGTACTGTTG CTGATCGGCC TGGCCGCGCT CGGCTACCTG
GCGATCCTGC TATGCGCCAC GCTGTTCATC TCGGTGCTGC TGGTGCTCAC GCGCTGGTAC
AAGGATTCCG AGATGGTGGT GTGGTTCACC GCCGGCCTCA GCCTGACCGA CTTCATCCGC
CCGGTGCTGC GCTTCTCGCT ACCGTTCGTG GTGCTGGTGG GGCTGCTGGC GCTGTTCGGC
TGGCCGTGGG CCAACCAGCA GAGCGCACTG TTCCGCGACC GCTTCGAGCA GCGCGACGTG
CTGTCGATGA TCTCCGCCGG CCGCTTCATC GAACCGGCGC ACGGCAACTA CGTGCTGTTC
ATCGAAGGCG TCGATGCCGG CATGAAGCAC GCGCGCAATC TCTTCGTCGC CAATGCCGAG
CAGGACAAGA TCGGCGTGGC GCTGGCCAAG ACCGGCGAGT TCAAGGCCGG CCCCAACGGC
GATCGCTACG TGGTGCTCGA CAAGGGCCGC CGCTACGAAG GCACGCCCGG CCAGCTGGAC
TACCGCATCG TCGAATTCGA CCGCTACGGC GTGAAGGTGG CCAACAAGCC GCCCCAGGCC
GACGCCAACC TGCCCACCAA GAGCCGCCCG ACCACCGAGC TGCTGTCCAA CCCGACCCCT
GAGAACATGG GCGAGCTGGT CTGGCGCATC GGCCTGCCGC TGCTGGCGCT CAACTTCGTG
CTGATCGCGA TCCCGCTGGC CTACGTCAAC CCGCGCCTGG GCCGCTACAC CCCGATGATC
TTCGCCGTGC TGATCTACCT GACGTACTCC AACCTGCTCA ACCTGTCGCA GGCATGGGTC
GCGCAGGGCA AGATGAGCGC GATGCTGGCC TGGTGGCCGA TCCACCTGGC GGCGTTCGTC
TGCGCCGGGC TGCTGTTCCG CTTCCGCCAC TACAGCGCGG CGGGCCTCAA GGGCATCTTC
GCCCTGCTCG GCTTCGCGCC GAAGAAGGCG GGCGCATGA
|
|---|
| Protein sequence | MIFEQALRRE LSFTAGAVFL VLLTFMLTTL VIRILGMAAN GEASPNDVLL LIGLAALGYL
AILLCATLFI SVLLVLTRWY KDSEMVVWFT AGLSLTDFIR PVLRFSLPFV VLVGLLALFG
WPWANQQSAL FRDRFEQRDV LSMISAGRFI EPAHGNYVLF IEGVDAGMKH ARNLFVANAE
QDKIGVALAK TGEFKAGPNG DRYVVLDKGR RYEGTPGQLD YRIVEFDRYG VKVANKPPQA
DANLPTKSRP TTELLSNPTP ENMGELVWRI GLPLLALNFV LIAIPLAYVN PRLGRYTPMI
FAVLIYLTYS NLLNLSQAWV AQGKMSAMLA WWPIHLAAFV CAGLLFRFRH YSAAGLKGIF
ALLGFAPKKA GA
|
|---|
| |