Gene RSc2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2366 
Symboldcd 
ID1221212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2570580 
End bp2571146 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID637238766 
Productdeoxycytidine triphosphate deaminase 
Protein accessionNP_520487 
Protein GI17547085 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0119092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA AATCCGACAA GTGGATCCGC CGCATGGCGG AGCAGCACGG CATGATCGAG 
CCGTTCGAGC CGGGGCAGGT GCGCGAGGCC GACGGCCGGC GCATCGTCTC CTACGGCACG
TCGAGCTACG GCTACGACAT CCGCTGCGCC GACGAATTCA AGATCTTCAC CAACATCAAC
AGCACCATCG TCGACCCGAA GAATTTCGAC GAGAAATCGT TCGTCGACTT CAAGGGCGAT
GTGTGCATCA TCCCGCCGAA CTCGTTCGCG CTGGCCCGCA CGATGGAGTA TTTCCGCATC
CCGCGCACCG TGCTGACGGT ATGCCTGGGC AAGAGCACTT ACGCGCGCTG CGGGATCATC
GTCAACGTCA CACCGTTCGA GCCCGAGTGG GAAGGCTACG TGACGCTGGA GTTCTCCAAC
ACCACGCCGC TGCCTGCCAA GATCTACGCC GGCGAAGGCT GCGCGCAGGT GCTGTTCTTC
GAAAGCGACG AGCCGTGCGA GACCTCGTAC CGGGACCGTG GCGGCAAGTA CCAGGGCCAG
CACGGCGTGA CGCTGCCCAA AACCTAG
 
Protein sequence
MSIKSDKWIR RMAEQHGMIE PFEPGQVREA DGRRIVSYGT SSYGYDIRCA DEFKIFTNIN 
STIVDPKNFD EKSFVDFKGD VCIIPPNSFA LARTMEYFRI PRTVLTVCLG KSTYARCGII
VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF ESDEPCETSY RDRGGKYQGQ
HGVTLPKT