Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2366 |
Symbol | dcd |
ID | 1221212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2570580 |
End bp | 2571146 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238766 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | NP_520487 |
Protein GI | 17547085 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0119092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AATCCGACAA GTGGATCCGC CGCATGGCGG AGCAGCACGG CATGATCGAG CCGTTCGAGC CGGGGCAGGT GCGCGAGGCC GACGGCCGGC GCATCGTCTC CTACGGCACG TCGAGCTACG GCTACGACAT CCGCTGCGCC GACGAATTCA AGATCTTCAC CAACATCAAC AGCACCATCG TCGACCCGAA GAATTTCGAC GAGAAATCGT TCGTCGACTT CAAGGGCGAT GTGTGCATCA TCCCGCCGAA CTCGTTCGCG CTGGCCCGCA CGATGGAGTA TTTCCGCATC CCGCGCACCG TGCTGACGGT ATGCCTGGGC AAGAGCACTT ACGCGCGCTG CGGGATCATC GTCAACGTCA CACCGTTCGA GCCCGAGTGG GAAGGCTACG TGACGCTGGA GTTCTCCAAC ACCACGCCGC TGCCTGCCAA GATCTACGCC GGCGAAGGCT GCGCGCAGGT GCTGTTCTTC GAAAGCGACG AGCCGTGCGA GACCTCGTAC CGGGACCGTG GCGGCAAGTA CCAGGGCCAG CACGGCGTGA CGCTGCCCAA AACCTAG
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Protein sequence | MSIKSDKWIR RMAEQHGMIE PFEPGQVREA DGRRIVSYGT SSYGYDIRCA DEFKIFTNIN STIVDPKNFD EKSFVDFKGD VCIIPPNSFA LARTMEYFRI PRTVLTVCLG KSTYARCGII VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF ESDEPCETSY RDRGGKYQGQ HGVTLPKT
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