| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2363 |
|---|
| Symbol | argH |
|---|
| ID | 1221209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2566073 |
|---|
| End bp | 2567488 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637238763 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | NP_520484 |
|---|
| Protein GI | 17547082 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.196819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC AACTCGCCAA GAAGGCCGAA GCGTGGTCCG CCCGCTTTAA CGAGCCGATG
TCCGACCTCG TCAAGCGCTA TACCGCCTCG GTGTTCTTCG ACAAGCGCCT CGCGCTGTTC
GACATCCAGG GCTCGCTCGC GCACGCGGCC ATGCTCGCCA AGCAGGGCAT CATCGCGGAG
GCCGATCGCG CTGCCATCGA GCAAGGCATG GCGCAGATCC GCCAGGAGAT CGAAGCCGGC
ACGTTCGAGT GGAAGCTGGA CCTGGAAGAC GTGCACCTGA ACATCGAAGC GCGCCTGACC
GCCATGGCGG GCGACGCCGG CAAGCGCCTG CACACCGGCC GCTCGCGCAA CGACCAGGTC
GCCACCGACA TCCGCCTGTG GCTGCGCAGC GAGATCGACA ATATCGTCGG CTTGCTCCGC
GCCCTGCGCG GCGCCCTGCT GGACCTGGCC GAGCAGCACA CCAACACCAT CGTCCCCGGC
TTCACGCACC TGCAGGTCGC GCAACCGGTG GTGTTCGGCC ACCACCTGCT GGCCTATGTC
GAGATGTTCA CGCGCGACAC CGAGCGCATG CTCGACGCCC GCAAGCGGGT CAACCGCCTG
CCGCTGGGCG CCGCCGCGCT GGCCGGCACG AGCTACCCGA TCGACCGCGA ATTCGTCGCG
CAGCAGCTGG GCTTCGACGG CGTGTGCCGC AACTCGCTGG ATGCGGTGTC GGACCGCGAC
TTCGCCATCG AATTCTGCGC CGCCGCCGCG CTGGTGATGA CGCACATCTC GCGCTTCTCG
GAAGAGCTGG TGCTGTGGAT GAGCCCGCGC GTGGGCTTCA TCGACATCGC CGACCGCTTC
TGCACCGGCA GCTCGATCAT GCCGCAGAAG AAGAACCCCG ACGTGCCCGA ACTGGCGCGC
GGCAAGACCG GCCGCGTCAA CGGCCACCTG ATCGGCCTGC TCACGCTGAT GAAGGGCCAG
CCGCTGGCCT ACAACAAGGA CAACCAGGAA GACAAGGAAC CGCTGTTCGA CACGGTCGAC
ACGGTGGTCG ACACGCTGCG CATCTTCGCC GACATGGTGC CCGGCATCAC GGTCAAGGCC
GACGCCATGC GCGCCGCCGC CCTGCAGGGC TACGCCACCG CCACCGACCT GGCCGACTAC
CTGGTCAAGC GCGGCCTGCC CTTCCGCGAC GCGCACGAAG CCGTGGCCCA CGCCGTGCGC
GCCTGCGACG ACCTGCGCTG CGACCTGGCC GACCTGTCGG TGACGCAGCT GCGCGAGATC
AGCGGCCTGG GTGACAAGGC GAACCTGATC GGCGACGACG TGCACGCCGT GCTGACGCTG
GAAGGCTCGG TTGCTTCGCG CAACCATATC GGCGGGACGG CGCCGGAGCA GGTGAGGCTG
GCGATTGTTG CGGCGCGGGC TGGGCTGGCG GGCTAA
|
|---|
| Protein sequence | MTSQLAKKAE AWSARFNEPM SDLVKRYTAS VFFDKRLALF DIQGSLAHAA MLAKQGIIAE
ADRAAIEQGM AQIRQEIEAG TFEWKLDLED VHLNIEARLT AMAGDAGKRL HTGRSRNDQV
ATDIRLWLRS EIDNIVGLLR ALRGALLDLA EQHTNTIVPG FTHLQVAQPV VFGHHLLAYV
EMFTRDTERM LDARKRVNRL PLGAAALAGT SYPIDREFVA QQLGFDGVCR NSLDAVSDRD
FAIEFCAAAA LVMTHISRFS EELVLWMSPR VGFIDIADRF CTGSSIMPQK KNPDVPELAR
GKTGRVNGHL IGLLTLMKGQ PLAYNKDNQE DKEPLFDTVD TVVDTLRIFA DMVPGITVKA
DAMRAAALQG YATATDLADY LVKRGLPFRD AHEAVAHAVR ACDDLRCDLA DLSVTQLREI
SGLGDKANLI GDDVHAVLTL EGSVASRNHI GGTAPEQVRL AIVAARAGLA G
|
|---|
| |