| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2340 |
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| Symbol | lolA |
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| ID | 1221186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2538065 |
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| End bp | 2538712 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238740 |
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| Product | outer-membrane lipoprotein carrier protein |
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| Protein accession | NP_520461 |
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| Protein GI | 17547059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.197859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGTGT TGAAAGCACG TCACCTGATG GCTGCCGGAC TGGTGTCGCT GGCAGCGTGG
TCGGCCGGCG CCCAGGCCGG CGCGATCGAG CAGCTCAATG CCTTCGTCAG CAACGTCACC
ACCGCGCGCG GCGAGTTCGT CCAGCGGCAG GTGAAGGGCG GCGCCAATGG CAGCCCGCTG
CGCGTGGCCG GCACCTCAAG CGGTGACTTC ACCTTCTCGC GCCCGGGCCG CTTCGTCTGG
CGCTACCTGA AGCCTTACGA GCAGCAACTG TCGGCCGATG GCCAGATGCT CTACATCTAC
GACAAGGACC TGAGCCAGGT CACGGAGCGC AAGCTCGATG CCTCGCTCGG CTCCAGCCCG
GCCGCGATCC TGTTCGGCAG CAACGATCTG GCGAAGAACT TCGTGCTCAA GGAAGGCGGC
ACCAAGGACG GCATCGACTG GGTCGAGCTG ACGCCCAAGG CGAAAGACAC CCAGTTCGAG
CGCGTCGCCA TCGGCTTCCG CGCGGGCGAG CTGGAGGGCA TGGAGTTGCG CGATGCTTTC
GGCAACACCA CGCTGCTGAC GTTCTCGCAT ATCCAGAAGA ATCCGCAACT GCCGGCCAGC
GCGTTCCGCT TCGTGCCGCC CAAGGGGGCC GACGTCATCA AGCAGTAA
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| Protein sequence | MFVLKARHLM AAGLVSLAAW SAGAQAGAIE QLNAFVSNVT TARGEFVQRQ VKGGANGSPL
RVAGTSSGDF TFSRPGRFVW RYLKPYEQQL SADGQMLYIY DKDLSQVTER KLDASLGSSP
AAILFGSNDL AKNFVLKEGG TKDGIDWVEL TPKAKDTQFE RVAIGFRAGE LEGMELRDAF
GNTTLLTFSH IQKNPQLPAS AFRFVPPKGA DVIKQ
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