| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2337 |
|---|
| Symbol | serS |
|---|
| ID | 1221183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2534810 |
|---|
| End bp | 2536126 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637238737 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | NP_520458 |
|---|
| Protein GI | 17547056 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.252974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA TCCAACTGCT CCGCAAAGAC ATCGACGCCG TCGCCGCGCG CCTGAACGAC
CGCGGCTACG AACTCGACGT GGCCGGCTTC GCCGCGCTCG AAGCGGAACG CAAGGCCATC
CAGACCCGTA CCGAAGAACT GCAGGCGCGC CGCAACAGCC TGTCCAAGCA GATCGGCATG
CTCAAGGGCA AGGGCGAGGA CGCCTCGGCG GTGATGGCGG AAGTCGCCGG CATCGGCGAC
GAGCTCAAGG CCTCGGCCGC GCAGCTCGAC GTGGTGCAGG GCAGGCTGCA GGACCTGCTG
CTGTCGATCC CGAACGTGCC GCACGAGAGC GTGCCGGCCG GCAAGAGCGA GGCCGAGAAC
GTCGAGGTGC GTCGCGAAGG CACGCCGCGC GCGTTCGACT TCCCGGTCAA GGACCATGTC
GATCTGGGCG CCGGGCTGGG GCTGGATTTC GACGTGGCCG CCAAGCTGAG CGGTTCGCGC
TTCGCGGTGC TCAAGGGCCC GGTGGCGCGC CTGCATCGCG CGCTCGCGCA GTTCATGCTC
GACACCCACA CGCAGGAGCA CGGCTACACC GAGGCCTACG TACCCTACAT CGTCAATGCC
GCGTCGATGC GCGGCACCGG CCAGTTGCCG AAGTTCGAGG AAGACCTGTT CCGCGTGCCC
CGCAAGATGG GACAGGCCAC TGAAGCCGAG GCCGGCGAGC ACGTCGAGAA TTTCTACCTG
ATCCCGACCG CCGAGGTGCC GCTGACCAAC CTCGTGCGCG ATGAGATCGT CGCGGGCGAT
GCGCTGCCGA TGAAGTTCGC CGCGCATTCG CCGTGCTTCC GCTCGGAGGC CGGCTCGTAC
GGCAAGGACA CGCGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTCGA GATGGTGCAG
ATCGTGCAGC CGGAGACGTC GTTCGAGGCG CTGGACGCCA TGACGCACCA TGCGGAGAAC
ATCCTGCGCA AGCTGGAGTT GCCGTTCCGC ACCGTCGTGC TGTGCACCGG CGACATGGGC
TTCGGCAGCA CCAAGACGTA CGACATCGAG GTGTGGATCC CCGCGCAGAA CACCTATCGC
GAGATCAGCT CGTGCTCCAA CATGGGCGAT TTCCAGGCGC GCCGCATGCA GGCCCGCTTC
CGCAATGCGC AGGGCAAGCC GGAGCTGCTG CACACGCTCA ACGGCTCCGG CCTCGCCGTG
GGCCGCACGC TGGTGGCCGT GCTGGAGAAC TACCAGAACG CCGATGGTTC GGTGACGGTG
CCGGCGGCGC TGCGCCCGTA CCTGGGCGGC CAAGCGGTGC TGAAACCGGC GGCCTGA
|
|---|
| Protein sequence | MLDIQLLRKD IDAVAARLND RGYELDVAGF AALEAERKAI QTRTEELQAR RNSLSKQIGM
LKGKGEDASA VMAEVAGIGD ELKASAAQLD VVQGRLQDLL LSIPNVPHES VPAGKSEAEN
VEVRREGTPR AFDFPVKDHV DLGAGLGLDF DVAAKLSGSR FAVLKGPVAR LHRALAQFML
DTHTQEHGYT EAYVPYIVNA ASMRGTGQLP KFEEDLFRVP RKMGQATEAE AGEHVENFYL
IPTAEVPLTN LVRDEIVAGD ALPMKFAAHS PCFRSEAGSY GKDTRGMIRQ HQFDKVEMVQ
IVQPETSFEA LDAMTHHAEN ILRKLELPFR TVVLCTGDMG FGSTKTYDIE VWIPAQNTYR
EISSCSNMGD FQARRMQARF RNAQGKPELL HTLNGSGLAV GRTLVAVLEN YQNADGSVTV
PAALRPYLGG QAVLKPAA
|
|---|
| |