Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2255 |
Symbol | |
ID | 1221100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2447482 |
End bp | 2448309 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238654 |
Product | transcription regulator protein |
Protein accession | NP_520376 |
Protein GI | 17546974 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.651554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG TTCCATTCAT GTCTTTCCTT TTTTGCATGT CCGTCTCCGA TCTGCCCGCC GAGAAGCCCA GCGATTCCTA TGTGCAGTCG TTCGCACGCG GGCTCTCGGT CATCCGTGCC TTCAATGCCG AGCGCCCCGC GCAAACGCTG TCCGAAGTGG CCGAGGCGAC CGGCCTCACG CGCGCCGGCG CCCGCCGCAT CCTGCTCACG CTGGTCAGCC TCGGCTACGT CAGCTTCGAG GGGCGGCTGT TCCGCCTGAC GCCCCGGATC CTCGACCTCG GCTTCGCGTA TCTCACCTCG ATGCCGTTCT GGAACCTGGC CGAGCCGGTC ATGGAAGAAC TGGTGCAGAC CGTCCACGAG AGCTGCTCGG CCTCGGTGCT GGACGGCACC GAGATCGTCT ACGTGCTGCG CGTGCCCACG CAGAAGATCA TCGCGCTGAA CCTGTCGGTC GGCAGCCGGC TGCCGGCGTT CTGCACATCG ATGGGGCGCG TGCTGCTGTC GGGGCTGCCA GAGGACCGGC TCGACATCGT GCTGCGCGAG TCGGACCGGC GCCCGCGCAC GCAGCGCACC ATCACCGAGG TCGACGCGCT CAAGGACGTG ATTGCCGGCG TGCGCGCGCA GGGCTGGGCG CTGGTCGACC AGGAACTGGA AGAAGGGCTG ATCTCGCTGT CGACGCCGAT CCGCAACCGG GCAGGCGATA TCATCGCCGC CATGAACATC AGCGGGCAGG CCAACCGCAC CTCGGCCAGG CAGATGACCC GGCAGTTTCT CGGCCCGCTG CAGCAGGCGG CCGAACGGAT TTCTTCCATG GTGCGGGTGC GAACCTGA
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Protein sequence | MKPVPFMSFL FCMSVSDLPA EKPSDSYVQS FARGLSVIRA FNAERPAQTL SEVAEATGLT RAGARRILLT LVSLGYVSFE GRLFRLTPRI LDLGFAYLTS MPFWNLAEPV MEELVQTVHE SCSASVLDGT EIVYVLRVPT QKIIALNLSV GSRLPAFCTS MGRVLLSGLP EDRLDIVLRE SDRRPRTQRT ITEVDALKDV IAGVRAQGWA LVDQELEEGL ISLSTPIRNR AGDIIAAMNI SGQANRTSAR QMTRQFLGPL QQAAERISSM VRVRT
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