| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2251 |
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| Symbol | pcaB |
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| ID | 1221096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2443255 |
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| End bp | 2444616 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637238650 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | NP_520372 |
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| Protein GI | 17546970 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.001838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCG CACTGCTCGA TCGTACCTTC TCCACACCGG CCATGCTGGC GGTGTGGTCC
GACGCGGCCA CCGTGCGCGC GATGCTCGAC GTGGAGGCCG CGCTGGCGCA GGCCGAGGGC
GAGGTCGGCG TGATCCCGGC GCAAGCCGTG GCGCCCATCC GCGCGGTGTG CGCCAGGGCG
ACGCTGGACC TGGAGGCGCT CGGCGCGGCC GCGGCCGGCG CGGGCAACCT CGCGATTCCG
CTGGTCAAAC AGCTGACCGC CGCCGTCGCG CAGCACGACG AACTCGCCGC GCGCTATGTG
CACTGGGGCG CGACCAGTCA GGACATCATC GATACCGGCC TGATGCTGCA ATGGCGGCAG
GCGGCCGCGC TGCTCGACGC CGATCTGCGG CAACTGGCCG ACGCGCTGGC CGCGCTGGCT
CGCGTGCATC GCGATACGCC GATGGTCGCG CGCACCTGGC TGCAGCAGGC GCTGCCGACC
ACCTTCGGCC GCAAGGTGGC CGGCTGGCTG GAGGCGGTGC ATCGCGCGCA GGACCGCCTG
GCCGCGCTGC GCGCGCATGT GCCCGCGCTG CAGTTCGGCG GCGCGGCCGG CACGCTGGCG
AGCCTCGGCA CGCAAGGCCG GGCCGTGGCG CAGGCTTTGG CGCAGGCGCT CGATCTGCCG
CTGCCCGCGG CGTCGTGGCA TGGCGAGCAG GACCGCATCG CCGACATCGG CGCCGCGCTG
GCTTTGCTGA CCGGCACGCT TGGCCACATG GCGCGCGACC TGTCGCTGAT GATGCAGACC
GAGGTGGGCG AGGTGGCCGA GCCGGCGGGT GCAGGCAAGG GCGGCTCATC CACCATGCCG
CACAAGCGCA ACCCGGTCGG CTGTGCCACC GTGCTGGCGG CGGCCACGCG CATGCCGGGG
CTGGCGGCGA CCCTGCTGGC CGCGCTGCCG CAGGAGCACG AGCGCGCGCT CGGCGGCTGG
CAGGCGCAAT GGGCCACGCT GCGCGAGATG GCGTGCCTCG CCGCCGGCGC GCTGGACCGC
ATGCGCGAGC TCATCGCCGG GCTGAACGTC GACGCCGCGC GGATGCGCGC CAACCTCGAC
CTGACGCGCG GCCTGATCCT GGCCGAAGCG GTGATGCTCG CCCTGGGCGC CGACCTGGGC
CGCCTGCAGG CGCACCACGT GGTGGAGGCC GCCAGCCGCC TGGCTGTCCG GCAGCACCGG
ACGCTGCGCG ACGTGCTGGC CGAAGACGCC GACGTGCTGC GCGCCTGGGG CGATGCGGCG
CCGCAGCGGC TGGACGCGCT GCTCGATCCC GCCCACTACC TCGGCGACGC GGCGGCCGCC
GTCGACCGCG TGCTGGCGGA ACACGACCGT CGCCGCGCCT GA
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| Protein sequence | MITALLDRTF STPAMLAVWS DAATVRAMLD VEAALAQAEG EVGVIPAQAV APIRAVCARA
TLDLEALGAA AAGAGNLAIP LVKQLTAAVA QHDELAARYV HWGATSQDII DTGLMLQWRQ
AAALLDADLR QLADALAALA RVHRDTPMVA RTWLQQALPT TFGRKVAGWL EAVHRAQDRL
AALRAHVPAL QFGGAAGTLA SLGTQGRAVA QALAQALDLP LPAASWHGEQ DRIADIGAAL
ALLTGTLGHM ARDLSLMMQT EVGEVAEPAG AGKGGSSTMP HKRNPVGCAT VLAAATRMPG
LAATLLAALP QEHERALGGW QAQWATLREM ACLAAGALDR MRELIAGLNV DAARMRANLD
LTRGLILAEA VMLALGADLG RLQAHHVVEA ASRLAVRQHR TLRDVLAEDA DVLRAWGDAA
PQRLDALLDP AHYLGDAAAA VDRVLAEHDR RRA
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