| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2250 |
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| Symbol | pcaD |
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| ID | 1221095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2442420 |
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| End bp | 2443232 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238649 |
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| Product | B-ketoadipate enol-lactone hydrolase transmembrane protein |
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| Protein accession | NP_520371 |
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| Protein GI | 17546969 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0146051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGGC TTGAACACGA CAACGTCCGC CTCTACCACG AATTCGACGA TGGCCCTGCC
CCGGCCAAGC CGGTGCTGGT GCTGTCCAAC TCGCTCGGCA CCGATCTCGG CATGTGGGCG
CCGCAGCTGG AGGCGCTGCG CCGGCATTTC CGGCTGCTGC GCTACGACAC CCGCGGCCAC
GGCCGGTCGA GCGTGCCCGA CGCGCCGTTC GGCGTGGCGC AGCTCGGCGG CGACGTGCTG
GCGCTGCTCG ACCACTACGA CATTGAATTC GCGCTGTTCT GCGGCCTGTC GATGGGCGGC
GTGACCGGCC TGTGGCTCGC CGCGCATCAC GGCGAGCGCT TTCCGCGCAT GGTGGTCAGC
AACACCGCCG CGCAGATCGG CACCCAGCAG AGCTGGAACG CCCGCATCGC GCAGGTGGAG
CAGCGCGGCA TGGGTGCCAT TACCGAAACG GTGCTCGAGC GCTGGTTCAC CGATGGCTAC
CGCGTCGCCG CGCCGGCGCG CGTCGACCTC GTCAAGGCGA TGCTGCTGGC GACGCCGCCG
GCCGGCTACA ACGGCAATTG CGCCGCCATC CGCGACGCCG ACCTGCGCGC GCAGCTCGAG
GCCATCCGCG TGCCGCTGCT CGCCATCGGC GGCACGCACG ACATCTCGAC GCCGGCCGCG
CAGACCCGGG CGATCGCGCA GGGCGTGCCC GGCGCGCAAT ACGTGGAGCT GTCCGCCGGC
CATCTCGCCA ACTGGGAGCA GGCCGAGGCC TATACCGATG TGCTGGTCGG CTTCCTGACC
ACCGGCGTCG CGCGCGAGGC CGTCCATGGA TGA
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| Protein sequence | MPWLEHDNVR LYHEFDDGPA PAKPVLVLSN SLGTDLGMWA PQLEALRRHF RLLRYDTRGH
GRSSVPDAPF GVAQLGGDVL ALLDHYDIEF ALFCGLSMGG VTGLWLAAHH GERFPRMVVS
NTAAQIGTQQ SWNARIAQVE QRGMGAITET VLERWFTDGY RVAAPARVDL VKAMLLATPP
AGYNGNCAAI RDADLRAQLE AIRVPLLAIG GTHDISTPAA QTRAIAQGVP GAQYVELSAG
HLANWEQAEA YTDVLVGFLT TGVAREAVHG
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