| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2219 |
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| Symbol | gcp |
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| ID | 1221064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2406380 |
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| End bp | 2407423 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238618 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | NP_520340 |
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| Protein GI | 17546938 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTCC TCGGCATCGA ATCCTCCTGC GACGAAACCG GCGTCGCCCT GTACGACACC
GACGCCGGCC TGCGCGCGCA CGCGCTCTAC TCGCAGATCG CCATGCACCG CGACTACGGC
GGCGTGGTGC CGGAGCTGGC CTCGCGCGAC CACATCCGCC GCGTGATCCC GCTGCTGGAG
GACGTGCTGG CCGAGGCCGG CGTCGGCCGC GCGGACATCG ACGCCATCGC CTATACGAAA
GGGCCCGGAC TGGCCGGCGC GCTGCTGGTG GGAGCCTCGG TCGCCAATGC GCTGGGCTTT
GCGCTGGGCA AGCCGCTGGT GGGCGTGCAT CACCTGGAAG GGCATCTGCT CTCGCCGCTG
CTGGAGGCGG ACCGGCCCGC GTTTCCGTTC CTGGCGCTGC TGGTGTCGGG CGGGCACACG
CAGTTGATGC GCGTCGATGC GGTCGGCCAG TACACGCTGC TGGGCGAAAC CCTCGACGAT
GCCGCCGGCG AGGCCTTCGA CAAGACCGCC AAGCTGCTCG GCCTCGGGTA TCCCGGCGGC
CCGGCCGTCT CGCGGCTGGC CGAGTTCGGC AACCCGGGCG CGTTCGAGCT GCCCCGGCCG
ATGCTGCATT CGGGCAATTT CGATTTCTCG TTCGCCGGTC TGAAGACCGC CGTGCTGACG
CAGGTGCGCA AACTCAATCT CGACGGCGGC GAGGCATGCG AACAGCCGCG CGCCGACTTG
GCCCGCGCCT TCGTCGATGC CATCGTCGAC GTGCTCGTCG CCAAGACGCT GCGCGCCGCG
CGCGAGCACG GCCTCAAGCG CATCGTGGTG GCGGGCGGCG TGGGCGCCAA CCGCCAGTTG
CGCGAGCGCC TGAATGCCGA AGGCGGCAAG CGTGGCCTGC GCGTCTACTA CCCCGACCTG
CAGTTCTGCA CCGACAACGG CGCCATGATC GCTTTCGCCG GCGCGATGCG GCTGCAGGCC
GACCCCGGCC AGGTCCAGTC AGGCTACGGC TACGGCGTCA CGCCGCGCTG GGACCTGGAA
GACATCCGCA TCCGGCAGGC ATGA
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| Protein sequence | MLVLGIESSC DETGVALYDT DAGLRAHALY SQIAMHRDYG GVVPELASRD HIRRVIPLLE
DVLAEAGVGR ADIDAIAYTK GPGLAGALLV GASVANALGF ALGKPLVGVH HLEGHLLSPL
LEADRPAFPF LALLVSGGHT QLMRVDAVGQ YTLLGETLDD AAGEAFDKTA KLLGLGYPGG
PAVSRLAEFG NPGAFELPRP MLHSGNFDFS FAGLKTAVLT QVRKLNLDGG EACEQPRADL
ARAFVDAIVD VLVAKTLRAA REHGLKRIVV AGGVGANRQL RERLNAEGGK RGLRVYYPDL
QFCTDNGAMI AFAGAMRLQA DPGQVQSGYG YGVTPRWDLE DIRIRQA
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