| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2136 |
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| Symbol | |
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| ID | 1220978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2316865 |
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| End bp | 2317923 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238532 |
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| Product | porin signal peptide protein |
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| Protein accession | NP_520257 |
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| Protein GI | 17546855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTACA TCATCACCCG CTGCATCGCA CCCGCTGTCA TTGCCGCTGC GCTCGCCCTG
CCCGCGCATG CCCAGTCTTC TGTCACGTTG TACGGACGGG TCGTCGGCGG CGTCGAGTAC
ATCGACAAGG TGGCCGTTCC GGCCACGGGC AAGACCGGAT CGCTGCTGCA AGCCGCCGGC
AATCAGTGGG GAACCAGCAT GTTCGGCATG AAAGGCAGCG AGTCGCTCGG CGGAGGTCTG
CAGGCGCTCT TTACGCTGGA AAGCGGCTTC AGTCTGCCCA ATTCCGCGCT GAACGGGCCG
GGCCTGTTCA ATCGCCGTTC GTACGTCGGG CTTTCCAGTC CGAGCTGGGG TACGTTGATC
GTCGGCAAGA ACCTGTCCAT CAGCAACGAT ATCTGGGACA TTGACCCGAC CGGGCAGCAA
TTCATGAGCA CCGCCACCCT CGTCAAGGGC AGGAACTGGC CGGGTGCCGA TAACATGATC
GAATACCGCT CCCCGGATCT GGGCGGATTC TCGTTCGGGG CCCAGGCTTC CCTCAGCGAG
CAACCCGCAG GACGGCGCGT CAGTGCTCAA GGGCTGTCGG CAACTTACCA GACCAGCGAC
CTCATGCTTC GGGGCATCTA TACGGAGCGG CGAGACAGTG CCGGCGCGTT CAGCGATGTC
TACAACGCTT CCAAGGATGG CATCCTGGGC GGCACGTATC GCATCGGGCC GGCCAAGCTC
TTTGCCGGGT ATGAACGCAT CCTGGCATCG CAGACCGGCG CGGACACGGC ACCTTCGGCG
CTCAGCCAGG CGTGGCTCGG GATCCGCTAC GACCTGACGC AAGCGGTGAC CCTCATTGGC
GCCGTCTACC ACGTCAAAAG CAACCAGTCC GGCGGCAATG CCACGCTGGC CATGCTGGGC
GTCGACTATT ACCTATCGAA GCGAACCTTC CTCTATGCCT CGCTCGGCGG GGTGAGCAAC
GGCGCGAACG CGGACTACGC GGCCGATGTC ACGGCGGCGG GCCCCGGCGT GGGCAAGTCG
CAACGCGTCG TTTATGTCGG CATGGGACAT TCGTTCTGA
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| Protein sequence | MTYIITRCIA PAVIAAALAL PAHAQSSVTL YGRVVGGVEY IDKVAVPATG KTGSLLQAAG
NQWGTSMFGM KGSESLGGGL QALFTLESGF SLPNSALNGP GLFNRRSYVG LSSPSWGTLI
VGKNLSISND IWDIDPTGQQ FMSTATLVKG RNWPGADNMI EYRSPDLGGF SFGAQASLSE
QPAGRRVSAQ GLSATYQTSD LMLRGIYTER RDSAGAFSDV YNASKDGILG GTYRIGPAKL
FAGYERILAS QTGADTAPSA LSQAWLGIRY DLTQAVTLIG AVYHVKSNQS GGNATLAMLG
VDYYLSKRTF LYASLGGVSN GANADYAADV TAAGPGVGKS QRVVYVGMGH SF
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