Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2099 |
Symbol | guaD |
ID | 1220940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2273388 |
End bp | 2274725 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238494 |
Product | guanine deaminase |
Protein accession | NP_520220 |
Protein GI | 17546818 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.716358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT TGCCGCCCGC GCCCGACGCC ACCCTCCACG CCTACCGCGG CCGCGTGCTG CATTTCCTGC ACGACCCGCA GTATCGCGAG CACGATGCCT ATCAGTACTG GGAAGACGGG CTGCTGGTCA TCGGCGCCGG CAAGGTCGTG CGGGCCGGCG ACCACGCCGC GCTCAAGGGC ACCCTGCCCG CCGGCGCGCA GGTGCACGAC TACAGCGGCA AGCTGATCGT CCCCGGCTTC ATCGACACGC ACATCCACTT CCCGCAGACG GACATCATCG CCTCGCCGTC GCCGGGCCTG CTGCACTGGC TGGAGACCTA CACCTTCCCC GAGGAGCGCC GCTTCGAAAG CCCGCAGTAC GCGGCAGGCG TAGCATCGTT CTTCCTCGAT GAGCTGCTGC GCAACGGCAC CACCAGCGCA ATGGTCTGGA GCACCGTGCA TCGCGGCTCG GCCGAGACGC TGTTCGAGCA GGCCCGGGCG CGCGGCATGC GCCTGATCAC CGGCAAGGTG ATGATGGACC GCAACTGCCC CGAATACCTG CGCGACACGG CCGAGCGCGG CGCGCGCGAT GCGGCCGACC TGATCGCGCG CTGGCACGGC AAGGACCGGC TCGCCTACGC CATCACGCCG CGCTTCGCGC CGACCTCGAG CGAAGCACAG CTGGCGGCCT GCGGTGAGCT GGCCCGGCAG CATCCGGACG TCTTCATCCA GACCCACGTC GCCGAGAACC CCGACGAAGT GAAATGGGTG GCCGAGCTGT TCCCCAATGC CCGCAGCTAC CTGGACGTCT ACGACCGCTA CGGCCTGCTG CGCCGCGGCG CCCTCTACGG CCATGCCATC TGGCTGGACG ACGGCGACCG CCGGCGCATG GCCGAGTCCG GCGCGGCCGT CGCGCACTGC CCCACCTCCA ACCTGTTCCT CGGCAGCGGT CTGTACAACT TCCACGCCAG CGACGCGCAC CGCCTGGCAC TGACGCTCGC CACCGACGTG GGCGGCGGCA GCTCGTTCTC GATGCTGCGC ACCATGGGCG CCGCGCACGA GGTCGCGCGC ATGGGCGGCT ACCACCTGAG CGCGCTGCGC CTGTTCTACC TGGCCACGCG CGGCGCCGCC GAGGCGCTTG GCTGGCAGGA CCGCATCGGC AGCTTCGTGC CGGGCGCGGA AGCCGACTTC ATCGTGCTCG ACCCGGCCGC CACGCCGCTG CTGGCGCGCC GCAATTCCCG CGCCGAAACG CTGGAGGCAC AGCTGTTCTC GCTGGCGCTG CTGGGCGAAG ACCGTGCCGT GGCCGCCACT TACATCCAGG GCGAACCCGC CAAATTCGCG GTTGGCGTAT CGGCCTGA
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Protein sequence | MTTLPPAPDA TLHAYRGRVL HFLHDPQYRE HDAYQYWEDG LLVIGAGKVV RAGDHAALKG TLPAGAQVHD YSGKLIVPGF IDTHIHFPQT DIIASPSPGL LHWLETYTFP EERRFESPQY AAGVASFFLD ELLRNGTTSA MVWSTVHRGS AETLFEQARA RGMRLITGKV MMDRNCPEYL RDTAERGARD AADLIARWHG KDRLAYAITP RFAPTSSEAQ LAACGELARQ HPDVFIQTHV AENPDEVKWV AELFPNARSY LDVYDRYGLL RRGALYGHAI WLDDGDRRRM AESGAAVAHC PTSNLFLGSG LYNFHASDAH RLALTLATDV GGGSSFSMLR TMGAAHEVAR MGGYHLSALR LFYLATRGAA EALGWQDRIG SFVPGAEADF IVLDPAATPL LARRNSRAET LEAQLFSLAL LGEDRAVAAT YIQGEPAKFA VGVSA
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