| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2065 |
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| Symbol | |
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| ID | 1220906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2237620 |
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| End bp | 2238624 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238460 |
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| Product | putative NADPH quinone oxidoreductase protein |
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| Protein accession | NP_520186 |
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| Protein GI | 17546784 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.465224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.69391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCGA TTGAAATCAC GCAGTACGGC GGTCCCGACG TCCTGAAACC GGCCGAGCGG
CCGATGCCGG AGCCGAAGGC CGGCGAGGTG CTGATCCGCG TGCGCGCTGC CGGGGTGAAC
CGGCCCGATG TGTTCCAGCG GACCGGCAAC TATCCGGTGC CGCCGGGCGC TTCCGATATC
CCGGGCCTGG AAGTGGCCGG CGAAATCGTC GGCGGCGATC TCGCGCACGC CGACAACCGG
TATGGCCTGC GCGCGGGCGA TCGGGTCTGT GCGCTGGTGC AGGGCGGCGG CTACGCTGAG
TTTTGCACGG CGCCGCTTGG CCAGGTGTTG CCGGTGCCGG CGGGGTTGTC CGACATCGAG
GCGGCGGCGC TGCCCGAGAA CTATTTCACG GTGTGGTCCA ACGTGTTCGA CCGCGGCCAG
CTGGGGCAGG GCGCGCATGG CAAGGGCGAG ACGCTGCTGG TGCAGGGCGG CTCCAGTGGC
ATCGGCACCA CGGCCATCCA GATGGCCTCC GCGCTCGGCT ATCGCGTGTT CGCCACGGCC
GGCAGCGACG AGAAGTGCGC CGCCTGCGTC GCGCTGGGCG CGGCGCGCGC CATCCGCTAC
AGGACCGAGG ATTTCGCCGA GGTCGTCAAG GCCGAGACGG GGCGCGGCGT CGATGTGGTG
CTCGACATGG TGGGCGGCAG CTACGTCGCG CGCGAGATTG CCTGCACGGC GGACGATGGC
CGTATCGTGC TGATCGCGCT GCTGGGCGGC GCCAAGGCCG AGGTGCCGCT GGGCGAGATC
CTGCGCAGGC GCATCACGCT GACGGGCTCG ACGCTGCGGC CCCGTCCCGT GGCGTTCAAG
GCGGCGATCG CCGCTCACCT GCATGACACG GTGTGGCCGC TGCTGGCTTC CGGTCGCATC
CGGCCGGTCA TCCACGAGGT GATGCCCGCG GAGCATGCCG CGCAGGCGCA CGCGCTGATG
GAATCGAGTG CGCACATCGG CAAGATCATG CTGACCTGGG GCTAG
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| Protein sequence | MRAIEITQYG GPDVLKPAER PMPEPKAGEV LIRVRAAGVN RPDVFQRTGN YPVPPGASDI
PGLEVAGEIV GGDLAHADNR YGLRAGDRVC ALVQGGGYAE FCTAPLGQVL PVPAGLSDIE
AAALPENYFT VWSNVFDRGQ LGQGAHGKGE TLLVQGGSSG IGTTAIQMAS ALGYRVFATA
GSDEKCAACV ALGAARAIRY RTEDFAEVVK AETGRGVDVV LDMVGGSYVA REIACTADDG
RIVLIALLGG AKAEVPLGEI LRRRITLTGS TLRPRPVAFK AAIAAHLHDT VWPLLASGRI
RPVIHEVMPA EHAAQAHALM ESSAHIGKIM LTWG
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