| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2059 |
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| Symbol | nuoD |
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| ID | 1220899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2233216 |
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| End bp | 2234469 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238453 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | NP_520180 |
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| Protein GI | 17546778 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.102892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0817308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA TCAAGAACTA CACCCTCAAC TTCGGCCCGC AGCACCCGGC CGCGCACGGC
GTGCTGCGTC TGGTGCTGGA GCTGGATGGC GAAGTCATCC AGCGCGCCGA CCCGCACATC
GGCCTGCTGC ACCGTGCGAC CGAGAAGCTC GCCGAGCAGA AGACCTGGAT TCAGAACGTG
CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCATGC CTACGTGATG
GCCATCGAGC GCCTGCTCGG CATCGACGTG CCGCTGCGCG CGCAGTACAT CCGCGTGATG
TTCGACGAGA TCACGCGGAT CATGAACCAC CTGATGTGGA TCGGCGCTCA CGCGCTGGAC
GTCGGTGCCA TGGCGGTGTT CCTGTACGCC TTCCGCGAGC GCGAAGACCT GTTTGACATG
TACGAGGCCG TGTCGGGCGC ACGCATGCAC GCGGCGTATT ACCGTCCGGG CGGCGTCTAC
CGCGACCTGC CGGACTCGAT GCCGCAGTAC AAGGCATCGA AAGTGCGCAA CGAGAAGGCA
CTGGCGGCCA TGAACGAAAC GCGTTCGGGA TCGCTGCTGG ACTTCATCGA GGCCTTCACC
GACCGCTTCC CGACGTACGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG
AAGCAGCGCC TGGTCGGCAT CGGCGTGGTG ACGCCCGAGC GCGCATTGCA GAAGGGCATG
ACCGGGCCGA TGCTGCGTGG CTCCGGCATT GCGTGGGACG TGCGCAAGAA GCAGCCGTAC
GAAGTGTACG ACCGCGTCGA TTTCGACATC CCGGTGGGCG TGAACGGCGA TTGCTACGAC
CGTTACCTGG TGCGCGTGGA AGAGATGCGC CAGAGCAACC GCATCGTCCG CCAGTGCGTG
GAATGGCTGC GCAAGAACCC GGGCCCGGTG ATCACCGACA ACCACAAGGT GGCACCGCCG
TCGCGCGTCG AGATGAAAAC CAACATGGAA GAGCTGATCC ACCACTTCAA GCTCTTCACC
GAAGGCATGC ACGTGCCCGA GGGCGAAGCG TATGCCGCCG TCGAGCATCC GAAGGGCGAG
TTCGGCATCT ACGTGATCTC GGACGGCGCC AACAAGCCGT ATCGCCTGAA GATCCGCGCG
CCGGGTTTCG CGCACCTGGC GGCGCTCGAC GAGATGGCCA AGGGGCACAT GATCGCCGAT
GCGGTGACGA TCATCGGTAC GCAAGACATC GTGTTCGGCG AGATCGACCG CTGA
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| Protein sequence | MADIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AEQKTWIQNV
PYMDRLDYVS MMVNEHAYVM AIERLLGIDV PLRAQYIRVM FDEITRIMNH LMWIGAHALD
VGAMAVFLYA FREREDLFDM YEAVSGARMH AAYYRPGGVY RDLPDSMPQY KASKVRNEKA
LAAMNETRSG SLLDFIEAFT DRFPTYVDEY ETLLTDNRIW KQRLVGIGVV TPERALQKGM
TGPMLRGSGI AWDVRKKQPY EVYDRVDFDI PVGVNGDCYD RYLVRVEEMR QSNRIVRQCV
EWLRKNPGPV ITDNHKVAPP SRVEMKTNME ELIHHFKLFT EGMHVPEGEA YAAVEHPKGE
FGIYVISDGA NKPYRLKIRA PGFAHLAALD EMAKGHMIAD AVTIIGTQDI VFGEIDR
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