Gene RSc2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2055 
SymbolnuoH 
ID1220895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2227878 
End bp2228942 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637238449 
ProductNADH dehydrogenase subunit H 
Protein accessionNP_520176 
Protein GI17546774 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.845348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.111844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT CGATTACCTC TTTCGGCGCG GCGACCTTCG GCGGCTGGTG GCCGCTGATC 
TGGACGCTGG TGCGTGCCGT TTGCATCATC CTGCCGCTGC TGCTGTGCGT GGCTTACCTG
ATCCTGTGGG AGCGCAAGCT GATCGGCTGG ATGCACGTGC GGGTGGGTCC GAACCGCGTG
GGCCCGATGG GCCTGCTGCA GCCGATCGCC GACGTGCTCA AGCTGCTGCT CAAGGAAGTC
ATGGTGCCGA GCGCGGTCAG CCGTGGCATG TACATCATCG CGCCGCTGAT GGTGCTGATG
CCGGCCGTGG CGATCTGGGC GGTGGTGCCG TTCCAGGCCG AGGCTGTGGT GTCGAACATC
AATGCCGGCC TGCTGTACGT GATGGCGATC AGTTCGGTGG GCGTGTACGG CGTGATCCTG
GCCGGCTGGG CCTCGAACTC CAAGTACGCG TTCCTGGGCG CGATGCGCGC CTCGGCACAG
ATGATCTCGT ACGAAATCGC CATGGGCTTC GCGCTCGTGA CGGTGCTGAT GGTCACCGGC
AGCCTGAACC TGTCGGACAT CGTCAATTCG CAGAACCGCG GCTTCTTCGC CAACCACGGC
ATCAACATCC TGTCGTGGAA CTGGCTGTCG CTGCTGCCGA TGTTCGGCGT GTATTTCATC
TCGGGCGTGG CCGAAACCAA CCGCCACCCG TTCGACGTGG TGGAAGGCGA ATCGGAAATC
GTGGCCGGCC ACATGATCGA ATACTCGGGC ATGGCGTTCG CGCTGTTCTT CCTGGCCGAG
TACATCAACA TGATCGTCAT CTCGGCGATG ACGGCGACGA TGTTCCTGGG CGGCTGGTCC
GCGCCGATCG ATGCGCCGGT GTTCAACTGG ATTCCGGGCT TCTTCTGGTT GCTGATCAAG
GTCTTCCTGT TGCTGTCGGT CTTCATCTGG CTGCGTGCGT CGTTCCCGCG CTACCGCTAT
GACCAGATCA TGCGCCTGGG CTGGAAGATC TTCATTCCGC TCACCGTGGG TTGGCTGATC
ATCGTTGCCA TCTGGCTGGT GTCGCCGTGG AACATCTGGA AGTAA
 
Protein sequence
MIESITSFGA ATFGGWWPLI WTLVRAVCII LPLLLCVAYL ILWERKLIGW MHVRVGPNRV 
GPMGLLQPIA DVLKLLLKEV MVPSAVSRGM YIIAPLMVLM PAVAIWAVVP FQAEAVVSNI
NAGLLYVMAI SSVGVYGVIL AGWASNSKYA FLGAMRASAQ MISYEIAMGF ALVTVLMVTG
SLNLSDIVNS QNRGFFANHG INILSWNWLS LLPMFGVYFI SGVAETNRHP FDVVEGESEI
VAGHMIEYSG MAFALFFLAE YINMIVISAM TATMFLGGWS APIDAPVFNW IPGFFWLLIK
VFLLLSVFIW LRASFPRYRY DQIMRLGWKI FIPLTVGWLI IVAIWLVSPW NIWK