Gene RSc2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2050 
SymbolnuoM 
ID1220890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2222690 
End bp2224156 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content62% 
IMG OID637238444 
ProductNADH dehydrogenase subunit M 
Protein accessionNP_520171 
Protein GI17546769 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.232549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0955875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTGT CTTTTGCGAT CTGGCTGCCG ATCTTTTTTG GCGTGCTGGT GCTGGCTTCG 
GGCTCAGACC GCAATCCCGG CTATGTCCGC TGGATGTCGC TGATCGGCTC GCTGGTCAGC
TTCGTGATCA CGCTGCCGCT GATCACGCGC TTCGACAAGT CGACCGCGGC GATGCAGTTC
GTCGAGAAGT CGACCTGGAT CGAGCGCTTC CACATCAGCT ACTACCTCGG GGTCGACGGC
ATCTCGATGT GGTTCGTGGT GCTGACGGCG TTCATCACGG TGATTGTCGT GATCTCGGCG
TGGGAAGTGA TCACCGAGCG TGTCGCGCAG TACATGGCGG CGTTCCTGAT CCTGTCGGGC
CTGATGATCG GCGTGTTCGC GGCGCTCGAC GGCCTGCTGT TCTACGTGTT CTTCGAGGCC
ACGCTGATCC CGATGTACAT CATCATCGGT GTGTGGGGCG GCCCGAACCG CGTGTACGCG
GCCATCAAGT TCTTCCTGTA CACGCTGCTG GGCTCGCTGC TGACGCTGGT TGCGTTCCTG
TACCTGTACT TCCACAGCGG CACGTTCGAG ATCCTGCAAT GGCACCAGTT GAAGCTGTCG
CTGAACGAGC AGATCCTGCT GTTCATCGCC TTCTTCATGG CGTTTGCCGT GAAGGTGCCG
ATGTGGCCGG TGCACACCTG GCTGCCGGAT GCCCACGTGG AAGCGCCGAC CGGCGGTTCG
GTGGTGCTGG CCGCCATCAT GCTGAAGCTG GGCGCGTACG GTTTCCTGCG GTTCTCGCTG
CCGATCGCGC CGGACGCGAG CCATAGCCTG GCGGCCTTCG TCATCGCGAT TTCGCTGATC
GCCGTGATCT ACATCGGCCT GGTGGCGCTG GTGCAGGCCG ACATGAAGAA GCTGGTGGCG
TATTCCTCGA TCGCGCACAT GGGCTTCGTC ACGCTGGGCT TCTTCATCTT CAACGAGATC
GGCGTCGAGG GCGGCATCGT GCAGATGATC TCGCACGGCT TCATCTCGGG CGCGATGTTC
CTGTGCATCG GCGTGCTGTA CGACCGCGTG CACTCGCGCC AGATCGCCGA CTACGGCGGT
GTGGTGAACA CGATGCCGAA GTTCGCGGCG CTGTCGGTGT TCTTCGCCAT GGCCAACTGC
GGCCTGCCGG CCACCTCCGG TTTCGTGGGC GAGTTCATGG TGATCCTGGG TTCGGTCAAG
TTCAACTTCT GGATCGGCCT GCTGGCGGCC ACCGCGCTGA TCTTCGGCGC AGCGTACTCG
CTGTGGATGG TCAAGCGCGT GATCTTCGGC GACGTGGCGA ACAAGCACGT GGCCGAGCTG
CAGGACCTGA ATGCGCGCGA ATTCTTCATG CTGGGCGTAC TCGCGATCGC GACCCTGTAC
ATGGGCCTGT ATCCGAAGCC TTTCACCGAT GTCATGCATG CGTCCGTGGT GAATCTCCTC
ACCCACGTGG CCCAGACCAA GCTGTAA
 
Protein sequence
MVLSFAIWLP IFFGVLVLAS GSDRNPGYVR WMSLIGSLVS FVITLPLITR FDKSTAAMQF 
VEKSTWIERF HISYYLGVDG ISMWFVVLTA FITVIVVISA WEVITERVAQ YMAAFLILSG
LMIGVFAALD GLLFYVFFEA TLIPMYIIIG VWGGPNRVYA AIKFFLYTLL GSLLTLVAFL
YLYFHSGTFE ILQWHQLKLS LNEQILLFIA FFMAFAVKVP MWPVHTWLPD AHVEAPTGGS
VVLAAIMLKL GAYGFLRFSL PIAPDASHSL AAFVIAISLI AVIYIGLVAL VQADMKKLVA
YSSIAHMGFV TLGFFIFNEI GVEGGIVQMI SHGFISGAMF LCIGVLYDRV HSRQIADYGG
VVNTMPKFAA LSVFFAMANC GLPATSGFVG EFMVILGSVK FNFWIGLLAA TALIFGAAYS
LWMVKRVIFG DVANKHVAEL QDLNAREFFM LGVLAIATLY MGLYPKPFTD VMHASVVNLL
THVAQTKL